RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 BRD7Q9NPI1 651 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 MKS1Q9NXB0 559 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 COPG2Q9UBF2 871 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 PTBP2Q9UKA9 531 aaKnown RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 KLK13Q9UKR3 277 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 POMT2Q9UKY4 750 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 CLCA2Q9UQC9 943 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 SH2B3Q9UQQ2 575 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 FIS1Q9Y3D6 152 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 PCDHGA1Q9Y5H4 931 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ENTPD2Q9Y5L3 495 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ACTL7BQ9Y614 415 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 GPC6Q9Y625 555 aaPredicted RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 KCNE2Q9Y6J6 123 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 COL5A1P20908 1838 aaPredicted RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 CNOT1A5YKK6 2376 aaKnown RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 CELSR3Q9NYQ7 3312 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 PCM1Q15154 2024 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 A0A0J9YVX5 310 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 IGHV5-10-1A0A0J9YXX1 117 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 FEZF1A0PJY2 475 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 TLCD2A6NGC4 264 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 A6NJY4 79 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 PCNX2A6NKB5 2137 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 TARM1B6A8C7 271 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 H3BQF6 201 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 STX16-NPEPL1H3BU86 382 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 MATN2O00339 956 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 STX16O14662 325 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 HAT1O14929 419 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 TM9SF1O15321 606 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 PRPF4O43172 522 aaKnown RBP eCLIP5.4□□□□□ -1.54
COPS3-208ENST00000486032 ATP8B1O43520 1251 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 H2AFYO75367 372 aaKnown RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 SH3BGRLO75368 114 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 DEAF1O75398 565 aaPredicted RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 CRCPO75575 148 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 IPO13O94829 963 aaKnown RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 ZWINTO95229 277 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 EIF2S1P05198 315 aaKnown RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 BPGMP07738 259 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 EBLN1P0CF75 366 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 THRAP10827 490 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 ERGP11308 486 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 PCNAP12004 261 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 CHN1P15882 459 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 EPB42P16452 691 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 NPPBP16860 134 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 NR1D1P20393 614 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 IMPDH1P20839 514 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 BGNP21810 368 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 CCND1P24385 295 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 CSTF2P33240 577 aaKnown RBP eCLIP5.4□□□□□ -1.54
COPS3-208ENST00000486032 SLC6A12P48065 614 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 SERPINB4P48594 390 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 PIK3CGP48736 1102 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 CCNG1P51959 295 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 PRKAA2P54646 552 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 PPP2R2AP63151 447 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 CYP4F2P78329 520 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 IRF8Q02556 426 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 PRDX1Q06830 199 aaKnown RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 TARDBPQ13148 414 aaKnown RBP eCLIP5.4□□□□□ -1.54
COPS3-208ENST00000486032 CHIT1Q13231 466 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 ILKQ13418 452 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 DDX39BQ13838 428 aaKnown RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 MPP2Q14168 576 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 SLBPQ14493 270 aaKnown RBP eCLIP5.4□□□□□ -1.54
COPS3-208ENST00000486032 C16orf72Q14CZ0 275 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 PCLAFQ15004 111 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 GPR19Q15760 415 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 CHI3L2Q15782 390 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 SLC5A12Q1EHB4 618 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 UNC50Q53HI1 259 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 XKR6Q5GH73 641 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 C3orf38Q5JPI3 329 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 ZNF678Q5SXM1 525 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 TMTC4Q5T4D3 741 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 LIPMQ5VYY2 423 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 TTC19Q6DKK2 380 aaPredicted RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 FCRL6Q6DN72 434 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 WDR74Q6RFH5 385 aaPredicted RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 LRRC70Q7Z2Q7 622 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 SLC22A9Q8IVM8 553 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 C19orf47Q8N9M1 422 aaKnown RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 OR4D9Q8NGE8 314 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 WDR48Q8TAF3 677 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 FLVCR1-AS1Q8TAF5 88 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 RDH11Q8TC12 318 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 AGR3Q8TD06 166 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 SREK1Q8WXA9 508 aaKnown RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 CCT6BQ92526 530 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 NEIL2Q969S2 332 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 MTFMTQ96DP5 389 aaKnown RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 PRR11Q96HE9 360 aaPredicted RBP5.4□□□□□ -1.54
COPS3-208ENST00000486032 TMEM74Q96NL1 305 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 TRAPPC9Q96Q05 1148 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 DEPDC7Q96QD5 511 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 CTRCQ99895 268 aa5.4□□□□□ -1.54
COPS3-208ENST00000486032 DPYSL5Q9BPU6 564 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms