RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 MLXIPLQ9NP71 852 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 SAYSD1Q9NPB0 183 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FAM114A2Q9NRY5 505 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 INTS7Q9NVH2 962 aaKnown RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 NINJ2Q9NZG7 142 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 SERTAD3Q9UJW9 196 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 PLCL2Q9UPR0 1127 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 TDRKHQ9Y2W6 561 aaKnown RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 AP1M2Q9Y6Q5 423 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 NINQ8N4C6 2090 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 USP9XQ93008 2570 aaPredicted RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 PTPN13Q12923 2485 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 LOC105369274A0A096LPK9 316 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 LOC102723532A0A0G2JNH3 316 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 A0A1B0GTL3 188 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 FAM95CA0A1B0GW59 222 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CCDC189A1A4V9 331 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 VSTM2BA6NLU5 285 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 ZNF839A8K0R7 811 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 ISM1B1AKI9 464 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 TMEM150CB9EJG8 249 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 PYCARD-AS1I3L0S3 204 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CDC7O00311 574 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 FFAR3O14843 346 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 GPR42O15529 346 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 ZNF749O43361 778 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CREG1O75629 220 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 SCRG1O75711 98 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CEACAM4O75871 244 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 B3GALT4O96024 378 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 NTRK1P04629 796 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 HBQ1P09105 142 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 SBK3P0C264 359 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 ACPPP15309 386 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CD22P20273 847 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 NR1D1P20393 614 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 HRH2P25021 359 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 PTPN4P29074 926 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 GP5P40197 560 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 SLC6A12P48065 614 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 RGS4P49798 205 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 SOX8P57073 446 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 IL2P60568 153 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CXADRP78310 365 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 ABATP80404 500 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 IRF9Q00978 393 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 NAB1Q13506 487 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 NAA25Q14CX7 972 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 PTCHD3Q3KNS1 767 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 KBTBD12Q3ZCT8 623 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 TCTE1Q5JU00 501 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 COLEC12Q5KU26 742 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 MANEAQ5SRI9 462 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 ARHGAP40Q5TG30 622 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 ICE2Q659A1 982 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 ARMC6Q6NXE6 501 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 C8orf74Q6P047 294 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 TTC23LQ6PF05 361 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 SUSD1Q6UWL2 747 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 LCTLQ6UWM7 567 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 UBE2R2Q712K3 238 aaPredicted RBP5.46□□□□□ -1.54
CUX1-208ENST00000485792 VN1R4Q7Z5H5 301 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 STRA8Q7Z7C7 330 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CMC1Q7Z7K0 106 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 PLD3Q8IV08 490 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 MCATQ8IVS2 390 aaKnown RBP5.46□□□□□ -1.54
CUX1-208ENST00000485792 CENPLQ8N0S6 344 aaPredicted RBP5.46□□□□□ -1.54
CUX1-208ENST00000485792 OR4N4Q8N0Y3 316 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 SPATA6LQ8N4H0 392 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 NKAPQ8N5F7 415 aaKnown RBP5.46□□□□□ -1.54
CUX1-208ENST00000485792 MNS1Q8NEH6 495 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CFAP61Q8NHU2 1237 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 PROKR1Q8TCW9 393 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 MCOLN3Q8TDD5 553 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 MZB1Q8WU39 189 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CT55Q8WUE5 264 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 NUDT8Q8WV74 236 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CATSPER2Q96P56 530 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 GPR78Q96P69 363 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 DPH7Q9BTV6 452 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 DHRS4Q9BTZ2 278 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 TRIM55Q9BYV6 548 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 TSPYL1Q9H0U9 437 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CCDC68Q9H2F9 335 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 ACSS3Q9H6R3 686 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 STARD5Q9NSY2 213 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 LNPEPQ9UIQ6 1025 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 TRMT6Q9UJA5 497 aaKnown RBP5.46□□□□□ -1.54
CUX1-208ENST00000485792 TUBD1Q9UJT1 453 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 KCND3Q9UK17 655 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 CROTQ9UKG9 612 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 SLC39A10Q9ULF5 831 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 SRPK3Q9UPE1 567 aa5.46□□□□□ -1.54
CUX1-208ENST00000485792 MTO1Q9Y2Z2 717 aaKnown RBP5.46□□□□□ -1.54
CUX1-208ENST00000485792 DIDO1Q9BTC0 2240 aaKnown RBP5.46□□□□□ -1.54
CUX1-208ENST00000485792 NCKAP5O14513 1909 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 NPEPPSL1A6NEC2 478 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 LRRC14BA6NHZ5 514 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ZNF891A8MT65 544 aaPredicted RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 E7EQ34 232 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms