RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 C2CD4AQ8NCU7 369 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-221ENST00000483778 HAS2Q92819 552 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 TM4SF19Q96DZ7 209 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 PWWP2AQ96N64 755 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 CYTH2Q99418 400 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 C14orf105Q9NVL8 296 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 HCN3Q9P1Z3 774 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 SGK494L7N484 410 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 SEC24DO94855 1032 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-221ENST00000483778 AHSGP02765 367 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 IL1RNP18510 177 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 MST1P26927 711 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 BCL6P41182 706 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 TDGF1P3P51864 188 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 TBPL1P62380 186 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 NAE1Q13564 534 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 HP1BP3Q5SSJ5 553 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-221ENST00000483778 FCRLBQ6BAA4 426 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 PDSS2Q86YH6 399 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 PPIL6Q8IXY8 311 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 SLC35F6Q8N357 371 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 OR51Q1Q8NH59 317 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 ALKBH8Q96BT7 664 aaKnown RBP17.04■□□□□ 0.32
ATG4B-221ENST00000483778 MAGEB10Q96LZ2 347 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-221ENST00000483778 OSBPL9Q96SU4 736 aa17.04■□□□□ 0.32
ATG4B-221ENST00000483778 UTP6Q9NYH9 597 aaKnown RBP17.04■□□□□ 0.32
ATG4B-221ENST00000483778 KCNE1BA0A087WTH5 132 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 PGRMC1O00264 195 aaKnown RBP17.03■□□□□ 0.32
ATG4B-221ENST00000483778 TXNDC9O14530 226 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 PRPF4O43172 522 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■■■■■ 30.8
ATG4B-221ENST00000483778 ZG16O60844 167 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 WFS1O76024 890 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 B3GALT4O96024 378 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 NPPBP16860 134 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 IVDP26440 423 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 DHX9Q08211 1270 aaKnown RBP17.03■□□□□ 0.32
ATG4B-221ENST00000483778 CRYMQ14894 314 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 TMEM214Q6NUQ4 689 aaKnown RBP17.03■□□□□ 0.32
ATG4B-221ENST00000483778 AGTRAPQ6RW13 159 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 FAM180AQ6UWF9 173 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 SLC26A11Q86WA9 606 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 ZCCHC10Q8TBK6 192 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 CALML6Q8TD86 181 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 MOCOSQ96EN8 888 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 EBNA1BP2Q99848 306 aaKnown RBP17.03■□□□□ 0.32
ATG4B-221ENST00000483778 CCDC177Q9NQR7 707 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-221ENST00000483778 OLAHQ9NV23 265 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 RIC8BQ9NVN3 520 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 TRMT6Q9UJA5 497 aaKnown RBP17.03■□□□□ 0.32
ATG4B-221ENST00000483778 IKZF3Q9UKT9 509 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 COMMD10Q9Y6G5 202 aa17.03■□□□□ 0.32
ATG4B-221ENST00000483778 DYTNA2CJ06 578 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 NRDCO43847 1150 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 MAN1A2O60476 641 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 TSPAN12O95859 305 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 C8orf89P0DMQ9 161 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 CDH1P12830 882 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 AVPR1BP47901 424 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 MEF2AQ02078 507 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-221ENST00000483778 NDUFA9Q16795 377 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 C1QL3Q5VWW1 255 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 CPEB2Q7Z5Q1 589 aaKnown RBP17.02■□□□□ 0.32
ATG4B-221ENST00000483778 FJX1Q86VR8 437 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 LMNTD2Q8IXW0 634 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 BCORP1Q8N888 145 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 MCOLN3Q8TDD5 553 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 ACTRT1Q8TDG2 376 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 PYCR2Q96C36 320 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 FAM167BQ9BTA0 163 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 SGPP1Q9BX95 441 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.02■□□□□ 0.321e-8■□□□□ 10
ATG4B-221ENST00000483778 DDX47Q9H0S4 455 aaKnown RBP17.02■□□□□ 0.32
ATG4B-221ENST00000483778 PARVBQ9HBI1 364 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 STMN3Q9NZ72 180 aa17.02■□□□□ 0.32
ATG4B-221ENST00000483778 TRAV17A0A0B4J275 112 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 CTAGE15A4D2H0 777 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 A8MUI8 341 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 H0YIG0 161 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 PCDH17O14917 1159 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 RDH16O75452 317 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 NSA2O95478 260 aaKnown RBP17.01■□□□□ 0.31
ATG4B-221ENST00000483778 STSP08842 583 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 PGAM1P18669 254 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 XCR1P46094 333 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 RPS15AP62244 130 aaKnown RBP17.01■□□□□ 0.31
ATG4B-221ENST00000483778 PMP22Q01453 160 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 MINDY4Q4G0A6 757 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 MFSD4BQ5TF39 518 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 HIBCHQ6NVY1 386 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-221ENST00000483778 RIPOR1Q6ZS17 1223 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 ANKRD37Q7Z713 158 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 CTAGE6Q86UF2 777 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 ZNF740Q8NDX6 193 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 OR5T3Q8NGG3 340 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 NR4A3Q92570 626 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 LINGO1Q96FE5 620 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 OR4K3Q96R72 315 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 NPAS2Q99743 824 aa17.01■□□□□ 0.31
ATG4B-221ENST00000483778 WDR83Q9BRX9 315 aaKnown RBP17.01■□□□□ 0.31
ATG4B-221ENST00000483778 ZNF860A6NHJ4 632 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms