RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 KLF15Q9UIH9 416 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 ANGPTL2Q9UKU9 493 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 PLXND1Q9Y4D7 1925 aa13.49□□□□□ -0.25
CLK3-204ENST00000483723 SPTBN5Q9NRC6 3674 aaKnown RBP13.49□□□□□ -0.25
CLK3-204ENST00000483723 HEATR5BQ9P2D3 2071 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 UNC80Q8N2C7 3258 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 IGKV1-8A0A0C4DH67 115 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 H7BY64 318 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 SCN2BO60939 215 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 ERN1O75460 977 aaKnown RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 ANP32DO95626 131 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 THEGLP0DJG4 465 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 HOXB9P17482 250 aaPredicted RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 TCN1P20061 433 aaPredicted RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 PEBP1P30086 187 aaKnown RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 SHMT2P34897 504 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 PTDSS1P48651 473 aaKnown RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 WNT3P56703 355 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 BNIP2Q12982 314 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 UGT8Q16880 541 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 RABL3Q5HYI8 236 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 DEPDC1Q5TB30 811 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 ZFP1Q6P2D0 407 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 IYDQ6PHW0 289 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 CAMKMTQ7Z624 323 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 PTRH1Q86Y79 214 aaKnown RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 DCP2Q8IU60 420 aaKnown RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 FAM160A2Q8N612 972 aaPredicted RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 ANKRD53Q8N9V6 530 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 BHLHE22Q8NFJ8 381 aaPredicted RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 OR8J3Q8NGG0 315 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 OR8J2Q8NGG1 315 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 NRG4Q8WWG1 115 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 PYDC1Q8WXC3 89 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 KLHDC7BQ96G42 594 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 ANKRD27Q96NW4 1050 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 PRAP1Q96NZ9 151 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 SARGQ9BW04 601 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 EBPLQ9BY08 206 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 MS4A8Q9BY19 250 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 TBC1D17Q9HA65 648 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 TMEM184CQ9NVA4 438 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 OR6C2Q9NZP2 312 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 VAPAQ9P0L0 249 aa13.48□□□□□ -0.25
CLK3-204ENST00000483723 GMPR2Q9P2T1 348 aaKnown RBP13.48□□□□□ -0.25
CLK3-204ENST00000483723 A0A096LPI6 279 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 TCRBV3S1A0A5B6 114 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 SEMA3DO95025 777 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 C8BP07358 591 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 ANXA4P09525 319 aaPredicted RBP13.47□□□□□ -0.25
CLK3-204ENST00000483723 CD27P26842 260 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 PTPN6P29350 595 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 GSK3BP49841 420 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 ERFP50548 548 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 ILF3Q12906 894 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLK3-204ENST00000483723 RBBP5Q15291 538 aaKnown RBP13.47□□□□□ -0.25
CLK3-204ENST00000483723 SF1Q15637 639 aaKnown RBP13.47□□□□□ -0.25
CLK3-204ENST00000483723 RUNDC3AQ59EK9 446 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 SLC30A9Q6PML9 568 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 MSRB3Q8IXL7 192 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 MFSD2AQ8NA29 543 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 HIPK4Q8NE63 616 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 PJA1Q8NG27 643 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 STARD8Q92502 1023 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 COQ8BQ96D53 544 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 GSDMCQ9BYG8 508 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 PAIP1Q9H074 479 aaKnown RBP13.47□□□□□ -0.25
CLK3-204ENST00000483723 OR51B5Q9H339 312 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 MUC13Q9H3R2 512 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 CROCCQ5TZA2 2017 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 A0A1W2PR77 199 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 TRBC2A0A5B9 178 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 ANKDD1BA6NHY2 528 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 PCDH7O60245 1069 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 LCMT2O60294 686 aaKnown RBP13.47□□□□□ -0.25
CLK3-204ENST00000483723 DNAJA2O60884 412 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 HRH2P25021 359 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 HTR1EP28566 365 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 RHDQ02161 417 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 LIPEQ05469 1076 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 COMMD6Q7Z4G1 85 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 SLC9B2Q86UD5 537 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 GPR180Q86V85 440 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 AMIGO1Q86WK6 493 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 OR2L3Q8NG85 312 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 CXorf40BQ96DE9 158 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 ITCHQ96J02 903 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 PPM1MQ96MI6 270 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 TCEAL2Q9H3H9 227 aaPredicted RBP13.47□□□□□ -0.25
CLK3-204ENST00000483723 RMND5AQ9H871 391 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 SPHK1Q9NYA1 384 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 SLC25A37Q9NYZ2 338 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 AHSPQ9NZD4 102 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 ACTR3BQ9P1U1 418 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 ATP6V1HQ9UI12 483 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 MCM8Q9UJA3 840 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 EXO1Q9UQ84 846 aaKnown RBP13.47□□□□□ -0.25
CLK3-204ENST00000483723 AP3M1Q9Y2T2 418 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 SLCO1B1Q9Y6L6 691 aa13.47□□□□□ -0.25
CLK3-204ENST00000483723 OR5K4A6NMS3 321 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms