RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DYRK1BQ9Y463 629 aa17.14■□□□□ 0.33
HDAC6-225ENST00000483506 KCNE2Q9Y6J6 123 aa17.14■□□□□ 0.33
HDAC6-225ENST00000483506 SPTA1P02549 2419 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 IGLV3-12A0A075B6K2 115 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 A0A096LPK6 155 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 FOXS1O43638 330 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 LCMT2O60294 686 aaKnown RBP17.13■□□□□ 0.33
HDAC6-225ENST00000483506 C1QL1O75973 258 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 KRT38O76015 456 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 FOLR3P41439 243 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 MSH2P43246 934 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 OR1D4P47884 311 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 COL9A2Q14055 689 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-225ENST00000483506 DSG2Q14126 1118 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 SLC9A5Q14940 896 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 NKG7Q16617 165 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 FAM83EQ2M2I3 478 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 C18orf21Q32NC0 220 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-225ENST00000483506 CATSPEREQ5SY80 951 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 TMEM214Q6NUQ4 689 aaKnown RBP17.13■□□□□ 0.33
HDAC6-225ENST00000483506 NXPE4Q6UWF7 544 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 RAB43Q86YS6 212 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 CAMKVQ8NCB2 501 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 UBTD2Q8WUN7 234 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDAC6-225ENST00000483506 NACC2Q96BF6 587 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 NXNL1Q96CM4 212 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 GPR78Q96P69 363 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 IP6K3Q96PC2 410 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 DRC3Q9H069 523 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 SPNS1Q9H2V7 528 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 EPB41L4BQ9H329 900 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 ALG9Q9H6U8 611 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 GPRC5BQ9NZH0 403 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 FETUBQ9UGM5 382 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 TLK1Q9UKI8 766 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 PTRH2Q9Y3E5 179 aaKnown RBP17.13■□□□□ 0.33
HDAC6-225ENST00000483506 IKBKGQ9Y6K9 419 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 PCSK5Q92824 1860 aa17.13■□□□□ 0.33
HDAC6-225ENST00000483506 FEZF1A0PJY2 475 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 NCF1BA6NI72 391 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-225ENST00000483506 NCF1CA8MVU1 366 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-225ENST00000483506 PRPF4O43172 522 aaKnown RBP eCLIP17.12■□□□□ 0.33
HDAC6-225ENST00000483506 WDR47O94967 919 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 KLHL2O95198 593 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 UMODP07911 640 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 NCF1P14598 390 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-225ENST00000483506 GNAZP19086 355 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 TYK2P29597 1187 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 AHRP35869 848 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 GDF5P43026 501 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 SCTRP47872 440 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 IRF9Q00978 393 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 CDC16Q13042 620 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 KCNAB2Q13303 367 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 ACAP2Q15057 778 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 NDUFA9Q16795 377 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 TEX35Q5T0J7 233 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 ASPGQ86U10 573 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 TBC1D19Q8N5T2 526 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 METTL27Q8N6F8 245 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-225ENST00000483506 KCTD4Q8WVF5 259 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 TSNARE1Q96NA8 513 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 CAPS2Q9BXY5 557 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 WWOXQ9NZC7 414 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 CD274Q9NZQ7 290 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 COPG2Q9UBF2 871 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 CTSFQ9UBX1 484 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 NUP210LQ5VU65 1888 aa17.12■□□□□ 0.33
HDAC6-225ENST00000483506 MED13Q9UHV7 2174 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 EXOC1LA0A1B0GW35 172 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 STK16O75716 305 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 MYBL2P10244 700 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 MTHFD2P13995 350 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 FBLP22087 321 aaKnown RBP17.11■□□□□ 0.33
HDAC6-225ENST00000483506 GCAP28676 217 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 MEF2AQ02078 507 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-225ENST00000483506 PWP1Q13610 501 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 ATG9BQ674R7 924 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 SLCO4C1Q6ZQN7 724 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 MRGPREQ86SM8 312 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 TMPRSS11BQ86T26 416 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 CNPY4Q8N129 248 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 AMER3Q8N944 861 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 ZNF740Q8NDX6 193 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 SLC13A3Q8WWT9 602 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 COL26A1Q96A83 441 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 AIF1LQ9BQI0 150 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 PITHD1Q9GZP4 211 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-225ENST00000483506 EHD1Q9H4M9 534 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 DNAJC11Q9NVH1 559 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 ZNF282Q9UDV7 671 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-225ENST00000483506 ZFP69BQ9UJL9 534 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 MRPS2Q9Y399 296 aaKnown RBP17.11■□□□□ 0.33
HDAC6-225ENST00000483506 SLC22A7Q9Y694 548 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 MAU2Q9Y6X3 613 aa17.11■□□□□ 0.33
HDAC6-225ENST00000483506 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
HDAC6-225ENST00000483506 SYCE1LA8MT33 242 aa17.1■□□□□ 0.33
HDAC6-225ENST00000483506 POC1B-GALNT4F8VUJ3 575 aa17.1■□□□□ 0.33
HDAC6-225ENST00000483506 H0YIG0 161 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms