RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TMA16Q96EY4 203 aaKnown RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 EEF2KMTQ96G04 330 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 C5orf34Q96MH7 638 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 FAM210AQ96ND0 272 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 SERPINB11Q96P15 392 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 GAL3ST4Q96RP7 486 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 CD180Q99467 661 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 DDX50Q9BQ39 737 aaKnown RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 MGME1Q9BQP7 344 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 MECRQ9BV79 373 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 TRIM31Q9BZY9 425 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 C6orf106Q9H6K1 298 aaPredicted RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 GPR35Q9HC97 309 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 MAGEE1Q9HCI5 957 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ALKBH4Q9NXW9 302 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ARMCX3Q9UH62 379 aaPredicted RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 SCML1Q9UN30 329 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 KCNK7Q9Y2U2 307 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 URB1O60287 2271 aaKnown RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 GCN1Q92616 2671 aaKnown RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 ANKRD36A6QL64 1941 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 TRPM6Q9BX84 2022 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 KNTC1P50748 2209 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 GOLGA6L4A6NEF3 574 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 FAM47DPA6NHR8 397 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 YJEFN3A6XGL0 299 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 B5MCH6 92 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 E7ENQ6 273 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 ANGPT2O15123 496 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 CD3EAPO15446 510 aaKnown RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 ACSL4O60488 711 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 DIAPH2O60879 1101 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 CBFA2T3O75081 653 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 MOCS3O95396 460 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 MOCS2O96007 188 aaPredicted RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 EGR2P11161 476 aaPredicted RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 CD9P21926 228 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 CD70P32970 193 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 SOX6P35712 828 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 SKIV2L2P42285 1042 aaKnown RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 SGSHP51688 502 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 C21orf59P57076 290 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 KIAA1024LP59773 190 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 RPS14P62263 151 aaKnown RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 TRA2BP62995 288 aaKnown RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 FKBP3Q00688 224 aaKnown RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 LRRC63Q05C16 580 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 DEUP1Q05D60 604 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 SP140Q13342 867 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 PNOCQ13519 176 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 CSHL1Q14406 222 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 ERCC6LQ2NKX8 1250 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 KIF19Q2TAC6 998 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 ZNF658Q5TYW1 1059 aaPredicted RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 MSANTD2Q6P1R3 559 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 PTCHD4Q6ZW05 846 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 BHLHA9Q7RTU4 235 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 SPATA19Q7Z5L4 167 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 SLC2A12Q8TD20 617 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 IRGQQ8WZA9 623 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 IGSF8Q969P0 613 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 BIRC7Q96CA5 298 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 WDFY2Q96P53 400 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 RBM14Q96PK6 669 aaKnown RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 NEU1Q99519 415 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 SPATA5L1Q9BVQ7 753 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 PACSIN1Q9BY11 444 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 C11orf54Q9H0W9 315 aaPredicted RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 TMEM245Q9H330 911 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 GOLPH3LQ9H4A5 285 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 SGK2Q9HBY8 427 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 CRLF2Q9HC73 371 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 PRSS16Q9NQE7 514 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 STOML2Q9UJZ1 356 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 INTS6Q9UL03 887 aaKnown RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 KIAA1257Q9ULG3 409 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 DRG1Q9Y295 367 aaKnown RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 COQ4Q9Y3A0 265 aa6.38□□□□□ -1.39
CLK1-212ENST00000482590 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.38□□□□□ -1.39
CLK1-212ENST00000482590 SMG1Q96Q15 3661 aaKnown RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 TRIM49BA6NDI0 452 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 LRRC72A6NJI9 287 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 EIF4E1BA6NMX2 242 aaKnown RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 CCDC188H7C350 402 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 ADAMDEC1O15204 470 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 ZSCAN9O15535 394 aaPredicted RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 RRP9O43818 475 aaKnown RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 E2F6O75461 281 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 LUC7L3O95232 432 aaKnown RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 SMC2O95347 1197 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 ESRRBO95718 433 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 APOEP02649 317 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 PAEPP09466 180 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 SBK3P0C264 359 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 ATXN1LP0C7T5 689 aaKnown RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 CDK4P11802 303 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 PRG2P13727 222 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 AGAP20933 346 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 FPR1P21462 350 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms