RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 STATHP02808 62 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 SLC35G6P0C7Q6 338 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 SPRP35270 261 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-213ENST00000482192 SOX8P57073 446 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 GUCY2DQ02846 1103 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 RAPSNQ13702 412 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 CSHL1Q14406 222 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 MYBPC3Q14896 1274 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 ZKSCAN8Q15776 578 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-213ENST00000482192 TUBB8Q3ZCM7 444 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 VWA2Q5GFL6 755 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 GRTP1Q5TC63 336 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 TMEM214Q6NUQ4 689 aaKnown RBP11.29□□□□□ -0.6
HMGN1-213ENST00000482192 KIRREL2Q6UWL6 708 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 CEP128Q6ZU80 1094 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 PRSS58Q8IYP2 241 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 PPM1NQ8N819 430 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 MFSD9Q8NBP5 474 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 OR4K1Q8NGD4 311 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 SLC13A3Q8WWT9 602 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 SLC5A11Q8WWX8 675 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 NEIL2Q969S2 332 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 TM4SF19Q96DZ7 209 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 SARGQ9BW04 601 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 TGIF2Q9GZN2 237 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 ZDHHC18Q9NUE0 388 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 C5AR2Q9P296 337 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 C3orf18Q9UK00 162 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 DYRK1BQ9Y463 629 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 KCNE2Q9Y6J6 123 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 FER1L5A0AVI2 2057 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 SPTBP11277 2137 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 TRBC2A0A5B9 178 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 MAP2K7O14733 419 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 PCDH17O14917 1159 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 PHGDHO43175 533 aaKnown RBP11.28□□□□□ -0.6
HMGN1-213ENST00000482192 OR1F1O43749 312 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 NSA2O95478 260 aaKnown RBP11.28□□□□□ -0.6
HMGN1-213ENST00000482192 CCDC166P0CW27 439 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 ACPPP15309 386 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 ITGA3P26006 1051 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 RAB10P61026 200 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 ATP6V0D1P61421 351 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 MEF2AQ02078 507 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-213ENST00000482192 KCNC4Q03721 635 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 PWP1Q13610 501 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 CATSPEREQ5SY80 951 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 IRAK1BP1Q5VVH5 260 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 THOC6Q86W42 341 aaKnown RBP11.28□□□□□ -0.6
HMGN1-213ENST00000482192 MMGT1Q8N4V1 131 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 OR11G2Q8NGC1 345 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 OR9A4Q8NGU2 314 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 FBF1Q8TES7 1133 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 TM9SF4Q92544 642 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 TSNARE1Q96NA8 513 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 MACROD1Q9BQ69 325 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 CLMPQ9H6B4 373 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 ANKHQ9HCJ1 492 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 MTRF1LQ9UGC7 380 aaKnown RBP11.28□□□□□ -0.6
HMGN1-213ENST00000482192 SLC22A14Q9Y267 594 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 MRPS2Q9Y399 296 aaKnown RBP11.28□□□□□ -0.6
HMGN1-213ENST00000482192 SLC22A7Q9Y694 548 aa11.28□□□□□ -0.6
HMGN1-213ENST00000482192 CTAGE15A4D2H0 777 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 IDSB3KWA1 339 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 MASP2O00187 686 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 FFAR3O14843 346 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 GPR42O15529 346 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 NDUFS4O43181 175 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 LCMT2O60294 686 aaKnown RBP11.27□□□□□ -0.61
HMGN1-213ENST00000482192 HPP00738 406 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 HEXBP07686 556 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 CTAGE8P0CG41 777 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 CD1DP15813 335 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 CXCR2P25025 360 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 PHBP35232 272 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 EMP2P54851 167 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 FOXK1P85037 733 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 MAT1AQ00266 395 aaKnown RBP11.27□□□□□ -0.61
HMGN1-213ENST00000482192 SLMAPQ14BN4 828 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 TGFBIQ15582 683 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 SYT16Q17RD7 645 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 NADK2Q4G0N4 442 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 COLEC12Q5KU26 742 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 TMPRSS11BQ86T26 416 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 CTAGE6Q86UF2 777 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 ZC3H7AQ8IWR0 971 aaKnown RBP11.27□□□□□ -0.61
HMGN1-213ENST00000482192 CTAGE4Q8IX94 777 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 TCAIMQ8N3R3 496 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 SPATA6LQ8N4H0 392 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 KCT2Q8NC54 265 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 NOA1Q8NC60 698 aaKnown RBP11.27□□□□□ -0.61
HMGN1-213ENST00000482192 ZCCHC10Q8TBK6 192 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 RHBDF1Q96CC6 855 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 UBXN10Q96LJ8 280 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 UNKQ9C0B0 810 aaKnown RBP11.27□□□□□ -0.61
HMGN1-213ENST00000482192 TSPYL1Q9H0U9 437 aa11.27□□□□□ -0.61
HMGN1-213ENST00000482192 ZNF552Q9H707 407 aaPredicted RBP11.27□□□□□ -0.61
HMGN1-213ENST00000482192 CNOT10Q9H9A5 744 aaKnown RBP11.27□□□□□ -0.61
HMGN1-213ENST00000482192 PELI2Q9HAT8 420 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms