RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 HRH2P25021 359 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 DCTP40126 519 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 FNTAP49354 379 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 PER3P56645 1201 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 RPS15AP62244 130 aaKnown RBP14.44□□□□□ -0.1
LIMS3-203ENST00000480744 CRYMQ14894 314 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 RNASEH2BQ5TBB1 312 aaKnown RBP14.44□□□□□ -0.1
LIMS3-203ENST00000480744 LRRC8EQ6NSJ5 796 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 RIPOR1Q6ZS17 1223 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 PRSS41Q7RTY9 318 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 VN1R4Q7Z5H5 301 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 C17orf64Q86WR6 236 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 LURAP1LQ8IV03 231 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 MYO1HQ8N1T3 1032 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 SLC35F6Q8N357 371 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 AMER2Q8N7J2 671 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 C2CD4AQ8NCU7 369 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-203ENST00000480744 GABPB2Q8TAK5 448 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-203ENST00000480744 CCDC138Q96M89 665 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 ZNF700Q9H0M5 742 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 TAS2R13Q9NYV9 303 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 HCN3Q9P1Z3 774 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 SH2B3Q9UQQ2 575 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 PDE10AQ9Y233 779 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 LOC102723996A0A087X1L8 192 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 IGHV3-20A0A0C4DH32 117 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 A0A1W2PQ72 361 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 FEZF1A0PJY2 475 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 H0YIG0 161 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 SEC24DO94855 1032 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-203ENST00000480744 C8GP07360 202 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 TNFSF10P50591 281 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 EFNA3P52797 238 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 AP2B1P63010 937 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 CSNK1G2P78368 415 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 DHX9Q08211 1270 aaKnown RBP14.43□□□□□ -0.1
LIMS3-203ENST00000480744 NAE1Q13564 534 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 RBM20Q5T481 1227 aaKnown RBP14.43□□□□□ -0.1
LIMS3-203ENST00000480744 RPUSD3Q6P087 351 aaKnown RBP14.43□□□□□ -0.1
LIMS3-203ENST00000480744 AGTRAPQ6RW13 159 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 TMEM205Q6UW68 189 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 LANCL3Q6ZV70 420 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 ACTRT1Q8TDG2 376 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 LINGO1Q96FE5 620 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 SLX1AQ9BQ83 275 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 TUBB6Q9BUF5 446 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 VN1R1Q9GZP7 353 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 PCBD2Q9H0N5 130 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 PARVBQ9HBI1 364 aa14.43□□□□□ -0.1
LIMS3-203ENST00000480744 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
LIMS3-203ENST00000480744 MYO7BQ6PIF6 2116 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 PABPN1LA6NDY0 278 aaKnown RBP14.42□□□□□ -0.1
LIMS3-203ENST00000480744 SGK494L7N484 410 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 NSA2O95478 260 aaKnown RBP14.42□□□□□ -0.1
LIMS3-203ENST00000480744 WDPCPO95876 746 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 HIST1H2AGP0C0S8 130 aaPredicted RBP14.42□□□□□ -0.1
LIMS3-203ENST00000480744 CDH1P12830 882 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 ICAM2P13598 275 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 HIST1H2ADP20671 130 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 BCL6P41182 706 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 XCR1P46094 333 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 CDKN2DP55273 166 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 TIAL1Q01085 375 aaKnown RBP eCLIP14.42□□□□□ -0.1
LIMS3-203ENST00000480744 ZNF33BQ06732 778 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 SP140Q13342 867 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 BBS9Q3SYG4 887 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 SPANXN3Q5MJ09 141 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 ABHD17BQ5VST6 288 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 HIBCHQ6NVY1 386 aaPredicted RBP14.42□□□□□ -0.1
LIMS3-203ENST00000480744 PAQR3Q6TCH7 311 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 ASPGQ86U10 573 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 SHISA5Q8N114 240 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 CAMKVQ8NCB2 501 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 OR51Q1Q8NH59 317 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 SUN3Q8TAQ9 357 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 HAS2Q92819 552 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 HIST1H2AHQ96KK5 128 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 TAAR6Q96RI8 345 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 HIST1H2AJQ99878 128 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 H2AFJQ9BTM1 129 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 DDX47Q9H0S4 455 aaKnown RBP14.42□□□□□ -0.1
LIMS3-203ENST00000480744 ANKHQ9HCJ1 492 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 PPANQ9NQ55 473 aaKnown RBP14.42□□□□□ -0.1
LIMS3-203ENST00000480744 SLC17A6Q9P2U8 582 aa14.42□□□□□ -0.1
LIMS3-203ENST00000480744 C19orf25Q9UFG5 118 aaPredicted RBP14.42□□□□□ -0.1
LIMS3-203ENST00000480744 CRYBG3Q68DQ2 2970 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 KCNE1BA0A087WTH5 132 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 OR2W5A6NFC9 320 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 A8MUI8 341 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 DNALI1O14645 258 aaPredicted RBP14.41□□□□□ -0.1
LIMS3-203ENST00000480744 SLC16A5O15375 505 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 ZSCAN12O43309 604 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 RDH16O75452 317 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 TTC4O95801 387 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 CCND1P24385 295 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 GABRB3P28472 473 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 GRK3P35626 688 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 KCNK10P57789 538 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 PDAP1Q13442 181 aaKnown RBP14.41□□□□□ -0.1
LIMS3-203ENST00000480744 PHKG1Q16816 387 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms