RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 ANGPTL1O95841 491 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 CATP04040 527 aaKnown RBP16.52■□□□□ 0.23
PKD1-213ENST00000480227 ANXA4P09525 319 aaPredicted RBP16.52■□□□□ 0.23
PKD1-213ENST00000480227 DDX6P26196 483 aaKnown RBP eCLIP16.52■□□□□ 0.23
PKD1-213ENST00000480227 HTR1BP28222 390 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 RYKP34925 604 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 HTRA4P83105 476 aaPredicted RBP16.52■□□□□ 0.23
PKD1-213ENST00000480227 TOP3AQ13472 1001 aaPredicted RBP16.52■□□□□ 0.23
PKD1-213ENST00000480227 LDLRAP1Q5SW96 308 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 ST13P5Q8NFI4 369 aaPredicted RBP16.52■□□□□ 0.23
PKD1-213ENST00000480227 OR7G3Q8NG95 312 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 OR8J2Q8NGG1 315 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 HUS1BQ8NHY5 278 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 GLMNQ92990 594 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 MAL2Q969L2 176 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 ERLEC1Q96DZ1 483 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 MAGEB10Q96LZ2 347 aaPredicted RBP16.52■□□□□ 0.23
PKD1-213ENST00000480227 TM9SF3Q9HD45 589 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 FAM120CQ9NX05 1096 aaKnown RBP16.52■□□□□ 0.23
PKD1-213ENST00000480227 SH2B3Q9UQQ2 575 aa16.52■□□□□ 0.23
PKD1-213ENST00000480227 GOLGA4Q13439 2230 aaKnown RBP16.52■□□□□ 0.23
PKD1-213ENST00000480227 KIAA1549LQ6ZVL6 1849 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 H0YIV9 168 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 MYO1DO94832 1006 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 ABCB1P08183 1280 aaPredicted RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 BMXP51813 675 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 CASP9P55211 416 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 ZNF829Q3KNS6 432 aaPredicted RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 ZC3H12BQ5HYM0 836 aaKnown RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 CPTPQ5TA50 214 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 CRTC3Q6UUV7 619 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 TMPRSS11BQ86T26 416 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 VN1R2Q8NFZ6 395 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 POF1BQ8WVV4 589 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 POP5Q969H6 163 aaKnown RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 TRIT1Q9H3H1 467 aaKnown RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 RPS6KA6Q9UK32 745 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 SAMHD1Q9Y3Z3 626 aaKnown RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 IRAK3Q9Y616 596 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 DGKBQ9Y6T7 804 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 GNG14A0A1W2PPG7 69 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 PLK4O00444 970 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 SCAMP2O15127 329 aaKnown RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 PRMT3O60678 531 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 HOXB6P17509 224 aaKnown RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 CEBPBP17676 345 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 EPHA2P29317 976 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 CTNNB1P35222 781 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 IRS1P35568 1242 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 CLK3P49761 638 aaKnown RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 DHCR24Q15392 516 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 CATSPEREQ5SY80 951 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 GPR155Q7Z3F1 870 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 ATL1Q8WXF7 558 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 MUL1Q969V5 352 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 VPS35Q96QK1 796 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 GPN2Q9H9Y4 310 aaPredicted RBP16.51■□□□□ 0.23
PKD1-213ENST00000480227 ERVK-18Q9QC07 812 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 FZD4Q9ULV1 537 aa16.51■□□□□ 0.23
PKD1-213ENST00000480227 J3QRK9 145 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 UGT2B11O75310 529 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 ZBTB11O95625 1053 aaPredicted RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 GBAP04062 536 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 INHBBP09529 407 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 ITGAMP11215 1152 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 PCMT1P22061 227 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 DNAJA1P31689 397 aaKnown RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 HNF4AP41235 474 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 DGKGP49619 791 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 GP2P55259 537 aaKnown RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 RPS13P62277 151 aaKnown RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 EMX1Q04741 257 aaPredicted RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 IL18R1Q13478 541 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 AQP6Q13520 282 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 SPCS2Q15005 226 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 KDM4DQ6B0I6 523 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 ERICH5Q6P6B1 374 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 B3GNT8Q7Z7M8 397 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 ZNF557Q8N988 423 aaPredicted RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 OR56A3Q8NH54 315 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 ZNF480Q8WV37 535 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 SNRNP27Q8WVK2 155 aaKnown RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 BORCS5Q969J3 196 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 FKBP10Q96AY3 582 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 FAM83CQ9BQN1 747 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 TBC1D23Q9NUY8 699 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 SH3BP4Q9P0V3 963 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 NFKBIL1Q9UBC1 381 aaPredicted RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 TDRKHQ9Y2W6 561 aaKnown RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 PCDHB11Q9Y5F2 797 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 GMPPBQ9Y5P6 360 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 CCDC88CQ9P219 2028 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 NUMA1Q14980 2115 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 AXIN1O15169 862 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 SPINT1O43278 529 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 BCAS1O75363 584 aaPredicted RBP16.5■□□□□ 0.23
PKD1-213ENST00000480227 HLA-EP13747 358 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 MLLT10P55197 1068 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 C21orf59P57076 290 aa16.5■□□□□ 0.23
PKD1-213ENST00000480227 GAB1Q13480 694 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms