RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TPD52L3Q96J77 140 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 NEDD4LQ96PU5 975 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 CDK5RAP1Q96SZ6 601 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 PITX2Q99697 317 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 CD244Q9BZW8 370 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 TBC1D14Q9P2M4 693 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 MAN2B2Q9Y2E5 1009 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 YIPF1Q9Y548 306 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 KCNK5O95279 499 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 ADRA2AP08913 450 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 BPIP17213 487 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 CD9P21926 228 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 S100A5P33763 92 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 CRYBA2P53672 197 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 PRKCDQ05655 676 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 BCL7AQ4VC05 210 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 ARMC12Q5T9G4 340 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 FAHD1Q6P587 224 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 DNAJB7Q7Z6W7 309 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 ELMOD1Q8N336 334 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 ZNF675Q8TD23 568 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 MYLIPQ8WY64 445 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 TBC1D20Q96BZ9 403 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 MYO19Q96H55 970 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 DMRTB1Q96MA1 342 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 CLPBQ9H078 707 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 PSORS1C1Q9UIG5 152 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 SNX8Q9Y5X2 465 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 PIKFYVEQ9Y2I7 2098 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 NUDT7P0C024 238 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 AQP1P29972 269 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 KDELR2P33947 212 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 CTSOP43234 321 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 HTR3AP46098 478 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 ATN1P54259 1190 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 ZNF45Q02386 682 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 IQCCQ4KMZ1 466 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 PTOV1Q86YD1 416 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 USP7Q93009 1102 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 ULK4Q96C45 1275 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 KCNS3Q9BQ31 491 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 CEP44Q9C0F1 390 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 ZFYVE1Q9HBF4 777 aa12.87□□□□□ -0.35
PDZRN3-208ENST00000479530 H3BQ06 376 aaPredicted RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 GFRA2O00451 464 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 RPLP0P05388 317 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 KRT8P05787 483 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ADORA3P0DMS8 318 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 GJA1P17302 382 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 SDC1P18827 310 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 EPORP19235 508 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 CLDN8P56748 225 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 OR2B6P58173 313 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 SMARCB1Q12824 385 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 NFATC2Q13469 925 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 IRF3Q14653 427 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 TBCEQ15813 527 aaPredicted RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 CDKN3Q16667 212 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 VMACQ2NL98 169 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 NRARPQ7Z6K4 114 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ZZZ3Q8IYH5 903 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 C2orf15Q8WU43 125 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 VOPP1Q96AW1 172 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 HRASLS5Q96KN8 279 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 NUAK2Q9H093 628 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 REEP1Q9H902 201 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 PLSCR3Q9NRY6 295 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 DDX28Q9NUL7 540 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 RLIMQ9NVW2 624 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ZNF221Q9UK13 617 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 TBC1D24Q9ULP9 559 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 TMA7Q9Y2S6 64 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 CASP8AP2Q9UKL3 1982 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 PDZK1P1A8MUH7 402 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 E9PQ18 207 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ZW10O43264 779 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ZNF821O75541 412 aaPredicted RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 CYP7B1O75881 506 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 EFEMP2O95967 443 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ENGP17813 658 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 STK19P49842 368 aaPredicted RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 LIMK1P53667 647 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 CDH18Q13634 790 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 DGKKQ5KSL6 1271 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 FAM124AQ86V42 546 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 DNAJC22Q8N4W6 341 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 APIPQ96GX9 242 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 IGSF21Q96ID5 467 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 EBPLQ9BY08 206 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ROGDIQ9GZN7 287 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 RUBCNLQ9H714 662 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 AFF4Q9UHB7 1163 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 OARD1Q9Y530 152 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 CLIC1O00299 241 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 CDK1P06493 297 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 TNFRSF1BP20333 461 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms