RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ALPK1Q96QP1 1244 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 ERVK-11Q9UQG0 969 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 NR4A1P22736 598 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 PTX3P26022 381 aaPredicted RBP23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 RPP38P78345 283 aaKnown RBP23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 C10orf62Q5T681 223 aaPredicted RBP23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 CLECL1Q8IZS7 167 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 TRAM1L1Q8N609 369 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 ZNF557Q8N988 423 aaPredicted RBP23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 GLMNQ92990 594 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 FZD4Q9ULV1 537 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 BOLA2-SMG1P6H3BVE0 249 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 BNIP3LO60238 219 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 LAG3P18627 525 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 PSMB9P28065 219 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 KRT20P35900 424 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 CCL23P55773 120 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 KCNJ10P78508 379 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 CAMK2GQ13555 558 aaPredicted RBP23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 E2F2Q14209 437 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 PDE12Q6L8Q7 609 aaKnown RBP23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 OR6Q1Q8NGQ2 317 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 SH3KBP1Q96B97 665 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 PLCXD1Q9NUJ7 323 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 ZNF282Q9UDV7 671 aaPredicted RBP23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 VPS4AQ9UN37 437 aa23.77■■□□□ 1.4
SYNGAP1-206ENST00000479510 ARHGEF33A8MVX0 844 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 PQBP1O60828 265 aaKnown RBP23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 NADKO95544 446 aaPredicted RBP23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 CATP04040 527 aaKnown RBP23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 NTRK1P04629 796 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 ALOX5P09917 674 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 TEKQ02763 1124 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 DMC1Q14565 340 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 AGTRAPQ6RW13 159 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 ADCK1Q86TW2 530 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 NPAS3Q8IXF0 933 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 MFSD4AQ8N468 514 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 NAT16Q8N8M0 369 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 C11orf65Q8NCR3 313 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 NDNFQ8TB73 568 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 ZFP90Q8TF47 636 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 CHTF18Q8WVB6 975 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 DOHHQ9BU89 302 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 BBS2Q9BXC9 721 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 PCDH12Q9NPG4 1184 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 SELENONQ9NZV5 590 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 CEP350Q5VT06 3117 aa23.76■■□□□ 1.39
SYNGAP1-206ENST00000479510 OR2A25A4D2G3 310 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 E7EQ34 232 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 RNASET2O00584 256 aaKnown RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 TEX28O15482 410 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 WBP4O75554 376 aaKnown RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 DIRAS1O95057 198 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 RGNQ15493 299 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 HKDC1Q2TB90 917 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 DEFB128Q7Z7B8 93 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 OR56A3Q8NH54 315 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 ZNF689Q96CS4 500 aaPredicted RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 MTERF1Q99551 399 aaKnown RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 DPH2Q9BQC3 489 aaPredicted RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 ZSCAN5AQ9BUG6 496 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 SGK2Q9HBY8 427 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 SIRT5Q9NXA8 310 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 STOX2Q9P2F5 926 aaPredicted RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 GABRR3A8MPY1 467 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 ADAMDEC1O15204 470 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 YY2O15391 372 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 FSHRP23945 695 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 RAE1P78406 368 aaKnown RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 HIST2H2ACQ16777 129 aaPredicted RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 CNKSR3Q6P9H4 555 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 CCDC71Q8IV32 467 aaPredicted RBP23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 RNF175Q8N4F7 328 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 KLHL23Q8NBE8 558 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 CD84Q9UIB8 345 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 DAPK2Q9UIK4 370 aa23.75■■□□□ 1.39
SYNGAP1-206ENST00000479510 DENND4CQ5VZ89 1909 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 SERPINB7O75635 380 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 FADS2O95864 444 aaKnown RBP23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 C1QCP02747 245 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 ANXA4P09525 319 aaPredicted RBP23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 IDSP22304 550 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 CCDC81Q6ZN84 652 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 GOT1L1Q8NHS2 421 aaPredicted RBP23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 REPS1Q96D71 796 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 TPD52L3Q96J77 140 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 NEURL2Q9BR09 285 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 BHLHE41Q9C0J9 482 aaPredicted RBP23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 ATAD3AQ9NVI7 634 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 ATP6V1HQ9UI12 483 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 BTBD3Q9Y2F9 522 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 TSPAN11A1L157 253 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 A8MVJ9 347 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 AXIN1O15169 862 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 SRPRAP08240 638 aaKnown RBP23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 RECQLP46063 649 aaPredicted RBP23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 TUBA1BP68363 451 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 NAE1Q13564 534 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms