RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 FAM180AQ6UWF9 173 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 PARGQ86W56 976 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 NUDT13Q86X67 352 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 CENPSQ8N2Z9 138 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 OR8J3Q8NGG0 315 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 A0A1W2PQ72 361 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 TGM5O43548 720 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 IGFBP6P24592 240 aaPredicted RBP13.9□□□□□ -0.18
COL20A1-206ENST00000479501 RGS8P57771 180 aaPredicted RBP13.9□□□□□ -0.18
COL20A1-206ENST00000479501 OR2B6P58173 313 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 ERVPABLB-1P60509 514 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 RPS13P62277 151 aaKnown RBP13.9□□□□□ -0.18
COL20A1-206ENST00000479501 KCNC3Q14003 757 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 ZNF730Q6ZMV8 503 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 CD200R1Q8TD46 325 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SMPDL3AQ92484 453 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SLC38A4Q969I6 547 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 TTLL2Q9BWV7 592 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 IL26Q9NPH9 171 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SDR39U1Q9NRG7 319 aaPredicted RBP13.9□□□□□ -0.18
COL20A1-206ENST00000479501 TAC3Q9UHF0 121 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SPEF1Q9Y4P9 236 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 ADAM12O43184 909 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 EEDO75530 441 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 HTR6P50406 440 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 ARSFP54793 590 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 TLR1Q15399 786 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 OGFRL1Q5TC84 451 aaPredicted RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 NCCRP1Q6ZVX7 275 aaPredicted RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 OXR1Q8N573 874 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 MEIOBQ8N635 442 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 MDGA1Q8NFP4 955 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 OR5AK3PQ8NH89 298 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 HERC2P3Q9BVR0 1158 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 TMEM9Q9P0T7 183 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 PHF24Q9UPV7 400 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 OAS3Q9Y6K5 1087 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 M0QX08 132 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 GBAP04062 536 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 RPLP0P05388 317 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 SRPRAP08240 638 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 SDC2P34741 201 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 RGRP47804 291 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 STXBP1P61764 594 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 LSAMPQ13449 338 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 SNAPC1Q16533 368 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 COQ5Q5HYK3 327 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 COLEC12Q5KU26 742 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 KHDRBS2Q5VWX1 349 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 KRT77Q7Z794 578 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 ZFAND4Q86XD8 727 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 TMEM25Q86YD3 366 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 KRTCAP2Q8N6L1 136 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 FBXL20Q96IG2 436 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 LRIG1Q96JA1 1093 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 RAD9AQ99638 391 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 BRINP2Q9C0B6 783 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 MED28Q9H204 178 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 PRDM8Q9NQV8 689 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 SPATA7Q9P0W8 599 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 FAM92AA1XBS5 289 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 CLPXO76031 633 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 SYN1P17600 705 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 CAPN3P20807 821 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 GMFBP60983 142 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 RBM48Q5RL73 367 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 SUSD1Q6UWL2 747 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 RASSF6Q6ZTQ3 369 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 CLEC14AQ86T13 490 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 NPAS3Q8IXF0 933 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 MARVELD2Q8N4S9 558 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 OR9A1PQ8NGU1 263 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 SLC35G5Q96KT7 338 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 MIR1-1HGQ9H1L0 117 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 KCNH6Q9H252 994 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 FBXL21Q9UKT6 434 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 NME7Q9Y5B8 376 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 ARHGEF33A8MVX0 844 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 TNFRSF10BO14763 440 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 SMAD6O43541 496 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 RFPL2O75678 378 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 DIRAS1O95057 198 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 PDYNP01213 254 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 C8BP07358 591 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 PRKACGP22612 351 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 RPL10P27635 214 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 OR10G2Q8NGC3 310 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 RAB11FIP5Q9BXF6 653 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 TOR3AQ9H497 397 aa13.89□□□□□ -0.19
COL20A1-206ENST00000479501 MRPS30Q9NP92 439 aaKnown RBP13.89□□□□□ -0.19
COL20A1-206ENST00000479501 MATN4O95460 622 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 MPC1LP0DKB6 136 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 LAMP2P13473 410 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 ZNF182P17025 639 aaPredicted RBP13.88□□□□□ -0.19
COL20A1-206ENST00000479501 GDI1P31150 447 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 FMO3P31513 532 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 SPINT3P49223 89 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 FOXA1P55317 472 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms