RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 RECQL5O94762 991 aaPredicted RBP12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 CXCL8P10145 99 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 PRKACGP22612 351 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 PTX3P26022 381 aaPredicted RBP12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 HOXA9P31269 272 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 HTR7P34969 479 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 DIO3P55073 304 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 CTBP1Q13363 440 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 LAPTM5Q13571 262 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 PWP1Q13610 501 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 SIM2Q14190 667 aaPredicted RBP12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 CLLU1Q5K131 121 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 ANKRD34AQ69YU3 496 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 PM20D1Q6GTS8 502 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 TEX261Q6UWH6 196 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 DLEU7Q6UYE1 221 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 COMMD7Q86VX2 200 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 P3H2Q8IVL5 708 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 C9orf62Q8N4C0 152 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 FAM86B1Q8N7N1 296 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 TTC29Q8NA56 475 aaPredicted RBP12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 PPHLN1Q8NEY8 458 aaKnown RBP12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 VANGL1Q8TAA9 524 aaPredicted RBP12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 RNF139Q8WU17 664 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 FAM162AQ96A26 154 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 KIAA1143Q96AT1 154 aaPredicted RBP12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 RNF31Q96EP0 1072 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 PDXPQ96GD0 296 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 COL21A1Q96P44 957 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 OPALINQ96PE5 141 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 MCCC1Q96RQ3 725 aaPredicted RBP12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 PRRG3Q9BZD7 231 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 PIF1Q9H611 641 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 TAS2R7Q9NYW3 318 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 PTTG3PQ9NZH4 202 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF224Q9NZL3 707 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 GLS2Q9UI32 602 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 GMEB2Q9UKD1 530 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 INVSQ9Y283 1065 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 U3KQ87 197 aa12.74□□□□□ -0.37
CNKSR3-204ENST00000479339 EFCAB10A6NFE3 127 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 SYN3O14994 580 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 KIAA0513O60268 411 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 PPM1BO75688 479 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 HMGN1P05114 100 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 CDK1P06493 297 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 POU2F2P09086 479 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 HNRNPA1P09651 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 WEE1P30291 646 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 RGS6P49758 472 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 GBX2P52951 348 aaPredicted RBP12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 BCAT1P54687 386 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 SNRPD2P62316 118 aaKnown RBP12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 ERVK-8P63133 956 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 IRF3Q14653 427 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 ZBTB6Q15916 424 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF79Q15937 498 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 BAK1Q16611 211 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 EML3Q32P44 896 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 PLET1Q6UQ28 207 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 RTL10Q7L3V2 364 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF367Q7RTV3 350 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 KLHDC8BQ8IXV7 354 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 PM20D2Q8IYS1 436 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 RBFAQ8N0V3 343 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 CYP4Z2PQ8N1L4 340 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF557Q8N988 423 aaPredicted RBP12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF548Q8NEK5 533 aaPredicted RBP12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 C9orf43Q8TAL5 461 aaPredicted RBP12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF583Q96ND8 569 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 TMEM209Q96SK2 561 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 CHCHD6Q9BRQ6 235 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 RHNO1Q9BSD3 238 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 KCNH6Q9H252 994 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 OR51E2Q9H255 320 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 SLC6A15Q9H2J7 730 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 OR51B5Q9H339 312 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 TUBB1Q9H4B7 451 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 SLAMF8Q9P0V8 285 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 GIMAP2Q9UG22 337 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 PSORS1C1Q9UIG5 152 aa12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 KLF2Q9Y5W3 355 aaPredicted RBP12.73□□□□□ -0.37
CNKSR3-204ENST00000479339 LINC00854A0A1B0GVQ3 168 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 RGS5O15539 181 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 SGTAO43765 313 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 MITFO75030 526 aaPredicted RBP12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF254O75437 659 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 WBP4O75554 376 aaKnown RBP12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 CYP7B1O75881 506 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 WDR47O94967 919 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 ZNF250P15622 560 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 PFKLP17858 780 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 ITGB6P18564 788 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 GRK5P34947 590 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 OR1D2P34982 312 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 ARPP19P56211 112 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 UFM1P61960 85 aa12.72□□□□□ -0.37
CNKSR3-204ENST00000479339 RBP5P82980 135 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms