RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 PTGR2Q8N8N7 351 aaPredicted RBP11.1□□□□□ -0.63
LSM2-212ENST00000477182 AVL9Q8NBF6 648 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 PDPRQ8NCN5 879 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 ZFPM2Q8WW38 1151 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 LCN9Q8WX39 176 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 THAP4Q8WY91 577 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 RHBDF1Q96CC6 855 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 FBXL8Q96CD0 374 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 PHF21BQ96EK2 531 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 MECRQ9BV79 373 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 TBC1D10AQ9BXI6 508 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 ULBP3Q9BZM4 244 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 APMAPQ9HDC9 416 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 WWOXQ9NZC7 414 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 SPATA7Q9P0W8 599 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 STOX2Q9P2F5 926 aaPredicted RBP11.1□□□□□ -0.63
LSM2-212ENST00000477182 COPG2Q9UBF2 871 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 TMCO1Q9UM00 188 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 G3BP2Q9UN86 482 aaKnown RBP11.1□□□□□ -0.63
LSM2-212ENST00000477182 ICKQ9UPZ9 632 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 PCDHGA6Q9Y5G7 932 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 SVILO95425 2214 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 MTORP42345 2549 aa11.1□□□□□ -0.63
LSM2-212ENST00000477182 NAV3Q8IVL0 2385 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 HEATR5BQ9P2D3 2071 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 AKAP9Q99996 3911 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 WDR91A4D1P6 747 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 LRRC14BA6NHZ5 514 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 A8MU76 341 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 TAPBPO15533 448 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 KLK8O60259 260 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 KDM1AO60341 852 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 BPGMP07738 259 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 CCNYL3P0C7X3 344 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 DHRS4L1P0CG22 281 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 CHN1P15882 459 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 PKLRP30613 574 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 ALDH3A1P30838 453 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 HSPA7P48741 367 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 PNLIPRP1P54315 467 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 PER3P56645 1201 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 TSTA3Q13630 321 aaPredicted RBP11.09□□□□□ -0.63
LSM2-212ENST00000477182 SETDB1Q15047 1291 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 CDKL4Q5MAI5 379 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 SP5Q6BEB4 398 aaPredicted RBP11.09□□□□□ -0.63
LSM2-212ENST00000477182 SULT1C3Q6IMI6 304 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 AGTRAPQ6RW13 159 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 TAX1BP1Q86VP1 789 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 C10orf107Q8IVU9 208 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 RBM12BQ8IXT5 1001 aaKnown RBP11.09□□□□□ -0.63
LSM2-212ENST00000477182 SYTL1Q8IYJ3 562 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 RAB42Q8N4Z0 105 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 PPFIBP2Q8ND30 876 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 OR4E2Q8NGC2 313 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 ZNF480Q8WV37 535 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 PNPLA2Q96AD5 504 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 ESAMQ96AP7 390 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 SH3KBP1Q96B97 665 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 SLC38A3Q99624 504 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 TMEM79Q9BSE2 394 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 MENTQ9BUN1 341 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 TRIM55Q9BYV6 548 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 ATG10Q9H0Y0 220 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 ACSS2Q9NR19 701 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 LNPEPQ9UIQ6 1025 aa11.09□□□□□ -0.63
LSM2-212ENST00000477182 PTBP2Q9UKA9 531 aaKnown RBP11.09□□□□□ -0.63
LSM2-212ENST00000477182 DIDO1Q9BTC0 2240 aaKnown RBP11.09□□□□□ -0.63
LSM2-212ENST00000477182 ANKUB1A6NFN9 424 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 IPO13O94829 963 aaKnown RBP11.08□□□□□ -0.64
LSM2-212ENST00000477182 SIX3O95343 332 aaPredicted RBP11.08□□□□□ -0.64
LSM2-212ENST00000477182 ERGP11308 486 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 EEF1DP29692 281 aaKnown RBP11.08□□□□□ -0.64
LSM2-212ENST00000477182 SHMT2P34897 504 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 HNMTP50135 292 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 RAB28P51157 221 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 PRKAA2P54646 552 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 ALDH18A1P54886 795 aaKnown RBP11.08□□□□□ -0.64
LSM2-212ENST00000477182 NAE1Q13564 534 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 FASTKQ14296 549 aaKnown RBP11.08□□□□□ -0.64
LSM2-212ENST00000477182 ARHGAP19Q14CB8 494 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 CYP2A13Q16696 494 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 PTCHD3Q3KNS1 767 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 AMIGO1Q86WK6 493 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 SLC22A9Q8IVM8 553 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 TCAIMQ8N3R3 496 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 ARFGAP2Q8N6H7 521 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 Q8NA96 180 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 LINC01555Q8NAE3 123 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 OR2L8Q8NGY9 312 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 FAM76AQ8TAV0 307 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 UBTD2Q8WUN7 234 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 ATL1Q8WXF7 558 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 PYCR2Q96C36 320 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 CCDC126Q96EE4 140 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 TMEM237Q96Q45 408 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 RAB11FIP5Q9BXF6 653 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 MFRPQ9BY79 579 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 SRMSQ9H3Y6 488 aa11.08□□□□□ -0.64
LSM2-212ENST00000477182 CNOT10Q9H9A5 744 aaKnown RBP11.08□□□□□ -0.64
LSM2-212ENST00000477182 ABCF3Q9NUQ8 709 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms