RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 C17orf62Q9BQA9 187 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 AIF1LQ9BQI0 150 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 TMEM109Q9BVC6 243 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 NLNQ9BYT8 704 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 MRPL46Q9H2W6 279 aaKnown RBP16.98■□□□□ 0.31
SMIM4-202ENST00000476842 EHD1Q9H4M9 534 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 CPSF2Q9P2I0 782 aaKnown RBP16.98■□□□□ 0.31
SMIM4-202ENST00000476842 XPR1Q9UBH6 696 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 OPTCQ9UBM4 332 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 IL17BQ9UHF5 180 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 DCDC2Q9UHG0 476 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 RUVBL1Q9Y265 456 aaKnown RBP16.98■□□□□ 0.31
SMIM4-202ENST00000476842 FARSAQ9Y285 508 aaKnown RBP16.98■□□□□ 0.31
SMIM4-202ENST00000476842 ASB1Q9Y576 335 aa16.98■□□□□ 0.31
SMIM4-202ENST00000476842 TNPO3Q9Y5L0 923 aaKnown RBP16.98■□□□□ 0.31
SMIM4-202ENST00000476842 GOLGA8RI6L899 631 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 OR1F1O43749 312 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 SMIM24O75264 130 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 MED26O95402 600 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 RECKO95980 971 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 SBK3P0C264 359 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 CXCR2P25025 360 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 AHRP35869 848 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 CASP2P42575 452 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 SCTRP47872 440 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 RPS15P62841 145 aaKnown RBP16.97■□□□□ 0.31
SMIM4-202ENST00000476842 CXADRP78310 365 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 REEP5Q00765 189 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 NKAIN1Q4KMZ8 207 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 SNX31Q8N9S9 440 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 SLC13A3Q8WWT9 602 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 WDR34Q96EX3 536 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 PITHD1Q9GZP4 211 aaPredicted RBP16.97■□□□□ 0.31
SMIM4-202ENST00000476842 SPNS1Q9H2V7 528 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 NT5DC2Q9H857 520 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 TMEM216Q9P0N5 145 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 NDOR1Q9UHB4 597 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 PCM1Q15154 2024 aa16.97■□□□□ 0.31
SMIM4-202ENST00000476842 SNRNP200O75643 2136 aaKnown RBP16.96■□□□□ 0.31
SMIM4-202ENST00000476842 FOXO6A8MYZ6 492 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 P2RX6O15547 441 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 PRAMEF4O60810 478 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 KATNA1O75449 491 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 CD63P08962 238 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 PIM1P11309 404 aaPredicted RBP16.96■□□□□ 0.31
SMIM4-202ENST00000476842 EPB42P16452 691 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 EPORP19235 508 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 ITGAXP20702 1163 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 VARSP26640 1264 aaKnown RBP16.96■□□□□ 0.31
SMIM4-202ENST00000476842 PTPN4P29074 926 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 PWP1Q13610 501 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 FAM53BQ14153 422 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 E2F2Q14209 437 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 TBCCQ15814 346 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 ARHGAP40Q5TG30 622 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 PRAMEF9Q5VWM5 478 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 PRMT9Q6P2P2 845 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 ASPGQ86U10 573 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 MVB12AQ96EY5 273 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 CRELD1Q96HD1 420 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 C10orf90Q96M02 699 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 GEMIN8Q9NWZ8 242 aaKnown RBP16.96■□□□□ 0.31
SMIM4-202ENST00000476842 IFT80Q9P2H3 777 aaPredicted RBP16.96■□□□□ 0.31
SMIM4-202ENST00000476842 COPG2Q9UBF2 871 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 LGALS13Q9UHV8 139 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 ZFP69BQ9UJL9 534 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 CDC14AQ9UNH5 594 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 PLAAQ9Y263 795 aa16.96■□□□□ 0.31
SMIM4-202ENST00000476842 ZNF891A8MT65 544 aaPredicted RBP16.95■□□□□ 0.3
SMIM4-202ENST00000476842 C9J4A7 227 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 STX16-NPEPL1H3BU86 382 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 TK2O00142 265 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 STX16O14662 325 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 WFS1O76024 890 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 CCT5P48643 541 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 MC1RQ01726 317 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 COL9A2Q14055 689 aaPredicted RBP16.95■□□□□ 0.3
SMIM4-202ENST00000476842 DOC2AQ14183 400 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 SLBPQ14493 270 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMIM4-202ENST00000476842 RBBP5Q15291 538 aaKnown RBP16.95■□□□□ 0.3
SMIM4-202ENST00000476842 NDUFA9Q16795 377 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 CRTC2Q53ET0 693 aaPredicted RBP16.95■□□□□ 0.3
SMIM4-202ENST00000476842 XKR6Q5GH73 641 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 MLIPQ5VWP3 458 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 C16orf46Q6P387 395 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 FAM198BQ6UWH4 519 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 TMIGD1Q6UXZ0 262 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 GPR155Q7Z3F1 870 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 IQCKQ8N0W5 287 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 KRT78Q8N1N4 520 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 TEX9Q8N6V9 391 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 PTGR2Q8N8N7 351 aaPredicted RBP16.95■□□□□ 0.3
SMIM4-202ENST00000476842 ANKRD53Q8N9V6 530 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 TRPV3Q8NET8 790 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 PHF21BQ96EK2 531 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 PTCD3Q96EY7 689 aaKnown RBP16.95■□□□□ 0.3
SMIM4-202ENST00000476842 RUFY1Q96T51 708 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 MACROD1Q9BQ69 325 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 EFCAB11Q9BUY7 163 aa16.95■□□□□ 0.3
SMIM4-202ENST00000476842 RRAGDQ9NQL2 400 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms