RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 C10orf62Q5T681 223 aaPredicted RBP15.88■□□□□ 0.13
TMEM53-208ENST00000476724 LIPIQ6XZB0 460 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 ZNF551Q7Z340 670 aaPredicted RBP15.88■□□□□ 0.13
TMEM53-208ENST00000476724 CAMKMTQ7Z624 323 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 TMEM179BQ7Z7N9 219 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 SLC22A15Q8IZD6 547 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 FBXO15Q8NCQ5 510 aaPredicted RBP15.88■□□□□ 0.13
TMEM53-208ENST00000476724 AP2M1Q96CW1 435 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 OCEL1Q9H607 264 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 PLGRKTQ9HBL7 147 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 SGK2Q9HBY8 427 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 BTNL2Q9UIR0 455 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 ATE1O95260 518 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 ELFN1P0C7U0 828 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 KDELR2P33947 212 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 POLR2IP36954 125 aaKnown RBP15.88■□□□□ 0.13
TMEM53-208ENST00000476724 MMP12P39900 470 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 CCR3P51677 355 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 CTSCP53634 463 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 ISL1P61371 349 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 POM121L1PQ3SYA9 428 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 SPIN4Q56A73 249 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 ANXA8L1Q5VT79 327 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 ZNF691Q5VV52 312 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 OR2T5Q6IEZ7 315 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 EP400NLQ6ZTU2 488 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 CHST15Q7LFX5 561 aaPredicted RBP15.88■□□□□ 0.13
TMEM53-208ENST00000476724 GPR155Q7Z3F1 870 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 ZZZ3Q8IYH5 903 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 CHPFQ8IZ52 775 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 TDHQ8IZJ6 230 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 CPA6Q8N4T0 437 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 SETD9Q8NE22 299 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 OR2T29Q8NH02 315 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 WFIKKN2Q8TEU8 576 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 REPS1Q96D71 796 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 MED8Q96G25 268 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 MTERF1Q99551 399 aaKnown RBP15.88■□□□□ 0.13
TMEM53-208ENST00000476724 KXD1Q9BQD3 176 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 DUSP26Q9BV47 211 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 FANCEQ9HB96 536 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 OBP2AQ9NY56 170 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 BAG5Q9UL15 447 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 PCDHB11Q9Y5F2 797 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 KCNE2Q9Y6J6 123 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 HSPE1-MOB4S4R3N1 261 aa15.88■□□□□ 0.13
TMEM53-208ENST00000476724 TMEM202A6NGA9 273 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 SCAMP2O15127 329 aaKnown RBP15.87■□□□□ 0.13
TMEM53-208ENST00000476724 ZNF682O95780 498 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 B3GALT4O96024 378 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 PIGAP37287 484 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 CD47Q08722 323 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 SLC14A1Q13336 389 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 ADAM15Q13444 863 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 ACOX1Q15067 660 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 ZNF648Q5T619 568 aaPredicted RBP15.87■□□□□ 0.13
TMEM53-208ENST00000476724 TMEM220Q6QAJ8 160 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 CBLL1Q75N03 491 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 EIF3MQ7L2H7 374 aaKnown RBP15.87■□□□□ 0.13
TMEM53-208ENST00000476724 NLRP8Q86W28 1048 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 SPARTQ8N0X7 666 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 LZICQ8WZA0 190 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 THAP11Q96EK4 314 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 PKP4Q99569 1192 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 ASPSCR1Q9BZE9 553 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 TMEFF2Q9UIK5 374 aaPredicted RBP15.87■□□□□ 0.13
TMEM53-208ENST00000476724 EYSQ5T1H1 3165 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 KRT87PA6NCN2 255 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 B4GAT1O43505 415 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 CPSF4O95639 269 aaKnown RBP15.87■□□□□ 0.13
TMEM53-208ENST00000476724 FABP3P05413 133 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 CCDC159P0C7I6 412 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 HLA-EP13747 358 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 PRKACGP22612 351 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 IMPA1P29218 277 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 EMP3P54852 163 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 DDX39BQ13838 428 aaKnown RBP15.87■□□□□ 0.13
TMEM53-208ENST00000476724 MEP1AQ16819 746 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 CPTPQ5TA50 214 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 XAF1Q6GPH4 301 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 RNF175Q8N4F7 328 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 PIK3C3Q8NEB9 887 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 RAB2BQ8WUD1 216 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 CHTF18Q8WVB6 975 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 ZNF566Q969W8 418 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 CXorf40BQ96DE9 158 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 OR4K3Q96R72 315 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 S1PR5Q9H228 398 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 TRIT1Q9H3H1 467 aaKnown RBP15.87■□□□□ 0.13
TMEM53-208ENST00000476724 ZDHHC4Q9NPG8 344 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 DEC1Q9P2X7 70 aa15.87■□□□□ 0.13
TMEM53-208ENST00000476724 NPC1O15118 1278 aa15.86■□□□□ 0.13
TMEM53-208ENST00000476724 DPM1O60762 260 aa15.86■□□□□ 0.13
TMEM53-208ENST00000476724 SLC16A8O95907 504 aa15.86■□□□□ 0.13
TMEM53-208ENST00000476724 SEMG1P04279 462 aa15.86■□□□□ 0.13
TMEM53-208ENST00000476724 DNAJA1P31689 397 aaKnown RBP15.86■□□□□ 0.13
TMEM53-208ENST00000476724 ST8SIA6P61647 398 aa15.86■□□□□ 0.13
TMEM53-208ENST00000476724 FCHO2Q0JRZ9 810 aa15.86■□□□□ 0.13
TMEM53-208ENST00000476724 PARM1Q6UWI2 310 aa15.86■□□□□ 0.13
TMEM53-208ENST00000476724 OR7G3Q8NG95 312 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms