RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 IKZF3Q9UKT9 509 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ZNF214Q9UL59 606 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 GABRQQ9UN88 632 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 TNPO3Q9Y5L0 923 aaKnown RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 C19orf81C9J6K1 198 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 PLA2G10O15496 165 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 KLK8O60259 260 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ECI2O75521 394 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 GPX5O75715 221 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 VIPP01282 170 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 AKT1P31749 480 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 RPS19P39019 145 aaKnown RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 HOXA1P49639 335 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 GDI2P50395 445 aaKnown RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 KCNQ1P51787 676 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 RGS1Q08116 209 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 EIF4HQ15056 248 aaKnown RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 RBBP7Q16576 425 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 MAPKAPK3Q16644 382 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 SAXO2Q658L1 398 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 HDDC2Q7Z4H3 204 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 SPATA2LQ8IUW3 424 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 C9orf62Q8N4C0 152 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 UFD1Q92890 307 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 PTP4A1Q93096 173 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 SPATA9Q9BWV2 254 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 SLC6A15Q9H2J7 730 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 TMEM245Q9H330 911 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ATP13A1Q9HD20 1204 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 GALPQ9UBC7 116 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 POLR3HQ9Y535 204 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ALG5Q9Y673 324 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 MROH6A6NGR9 719 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 OR51F1A6NGY5 319 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 CCL22O00626 93 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 GABRDO14764 452 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 MATN3O15232 486 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 MAFKO60675 156 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 OR4F21O95013 312 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 EPOP01588 193 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 CSKP41240 450 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 CLCN3P51790 818 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 OAZ1P54368 228 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 WNT3AP56704 352 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 GTDC1Q4AE62 458 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 OR4F3Q6IEY1 312 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 KDELC1Q6UW63 502 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 ARHGAP12Q8IWW6 846 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 ATPAF2Q8N5M1 289 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 OR56A4Q8NGH8 313 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 OR8K5Q8NH50 307 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 TRAPPC12Q8WVT3 735 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 BTN2A2Q8WVV5 523 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 YIPF5Q969M3 257 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 PGAP3Q96FM1 320 aaPredicted RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 DERL2Q9GZP9 239 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 CXCL16Q9H2A7 254 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 SAMD4AQ9UPU9 718 aaKnown RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 PIPSLA2A3N6 862 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 WWP2O00308 870 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 PER2O15055 1255 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 PDE9AO76083 593 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 SEMG1P04279 462 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 ARF4P18085 180 aaPredicted RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 HMGB2P26583 209 aaKnown RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 GGT2P36268 569 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 CPT1AP50416 773 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 ARFIP1P53367 373 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 PER3P56645 1201 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 PTPRRQ15256 657 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 GRIK4Q16099 956 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.23□□□□□ -0.774e-7■■■■■ 32.3
ABCF1-205ENST00000475993 FAM174BQ3ZCQ3 159 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 RFTN2Q52LD8 501 aaPredicted RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 FAM180BQ6P0A1 224 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 KRT77Q7Z794 578 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 GPAT4Q86UL3 456 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 JAZF1Q86VZ6 243 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 STX19Q8N4C7 294 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 GDPD1Q8N9F7 314 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 FUBP1Q96AE4 644 aaKnown RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 HYLS1Q96M11 299 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 GPR137Q96N19 417 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 COLEC11Q9BWP8 271 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 TAPBPLQ9BX59 468 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 SORBS1Q9BX66 1292 aaKnown RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 ASPNQ9BXN1 380 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 DUSP16Q9BY84 665 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 MS4A7Q9GZW8 240 aaPredicted RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 TRIM45Q9H8W5 580 aaPredicted RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 LRFN2Q9ULH4 789 aa10.23□□□□□ -0.77
ABCF1-205ENST00000475993 ZNF490Q9ULM2 529 aaPredicted RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 SAMHD1Q9Y3Z3 626 aaKnown RBP10.23□□□□□ -0.77
ABCF1-205ENST00000475993 BEST1O76090 585 aa10.22□□□□□ -0.77
ABCF1-205ENST00000475993 DIRAS1O95057 198 aa10.22□□□□□ -0.77
ABCF1-205ENST00000475993 PXNP49023 591 aaPredicted RBP10.22□□□□□ -0.77
ABCF1-205ENST00000475993 ST3GAL4Q11206 333 aa10.22□□□□□ -0.77
ABCF1-205ENST00000475993 VEPH1Q14D04 833 aa10.22□□□□□ -0.77
ABCF1-205ENST00000475993 TSNQ15631 228 aaKnown RBP10.22□□□□□ -0.77
ABCF1-205ENST00000475993 SSX1Q16384 188 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms