RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TRIM54Q9BYV2 358 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 ZNF700Q9H0M5 742 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 GRPEL1Q9HAV7 217 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 MKL2Q9ULH7 1088 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 NTNG1Q9Y2I2 539 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 SVILO95425 2214 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 NBPF19A0A087WUL8 3843 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 WFS1O76024 890 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 UQCRHP07919 91 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 C8orf89P0DMQ9 161 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 SOX11P35716 441 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 AP1S2P56377 157 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 CSNK1G2P78368 415 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 ARG2P78540 354 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 NAE1Q13564 534 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 RBM20Q5T481 1227 aaKnown RBP19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 FAAH2Q6GMR7 532 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 LCTLQ6UWM7 567 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 VN1R4Q7Z5H5 301 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 OR9A4Q8NGU2 314 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 BRIX1Q8TDN6 353 aaKnown RBP19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 GRHL3Q8TE85 626 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 C5orf34Q96MH7 638 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 TUBB6Q9BUF5 446 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 SGPP1Q9BX95 441 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 ATG10Q9H0Y0 220 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 PTGFRNQ9P2B2 879 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 DOPEY1Q5JWR5 2465 aa19.29■□□□□ 0.68
PDLIM4-206ENST00000474421 BANF1O75531 89 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 EDN3P14138 238 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 IVDP26440 423 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 MAT1AQ00266 395 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 SYT16Q17RD7 645 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 TEDDM1Q5T9Z0 273 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 DUPD1Q68J44 220 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 TMEM214Q6NUQ4 689 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 FAM180AQ6UWF9 173 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 MBOAT1Q6ZNC8 495 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 ASPGQ86U10 573 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 IGDCC3Q8IVU1 814 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 FAR1Q8WVX9 515 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 ATL1Q8WXF7 558 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 PSMF1Q92530 271 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 ALKBH8Q96BT7 664 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 ANKHQ9HCJ1 492 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 ARL15Q9NXU5 204 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 C19orf25Q9UFG5 118 aaPredicted RBP19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 ERRFI1Q9UJM3 462 aaPredicted RBP19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 VWA7Q9Y334 891 aa19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 MRPS2Q9Y399 296 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-206ENST00000474421 SCN2AQ99250 2005 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 SCN3AQ9NY46 2000 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 ZGRF1Q86YA3 2104 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 TRAV17A0A0B4J275 112 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 WIPF3A6NGB9 483 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 SLC35G6P0C7Q6 338 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 ELK3P41970 407 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 DR1Q01658 176 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 FRG1Q14331 258 aaKnown RBP19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 PCOLCEQ15113 449 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 INAQ16352 499 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 PHKG1Q16816 387 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 HECTD2Q5U5R9 776 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 FAM45BPQ6NSW5 357 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 TBC1D19Q8N5T2 526 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 BCORP1Q8N888 145 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 GPATCH11Q8N954 259 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 OR1N1Q8NGS0 311 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 OR51Q1Q8NH59 317 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 FAM45AQ8TCE6 357 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 SLC13A3Q8WWT9 602 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 HAS2Q92819 552 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 TM4SF19Q96DZ7 209 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 CFAP36Q96G28 342 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 TEKT2Q9UIF3 430 aa19.27■□□□□ 0.68
PDLIM4-206ENST00000474421 CPAMD8Q8IZJ3 1885 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 TSPAN12O95859 305 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 LDLRP01130 860 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 STATHP02808 62 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 ENO2P09104 434 aaPredicted RBP19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 MYBL2P10244 700 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 CDH1P12830 882 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 NPPBP16860 134 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 BCL6P41182 706 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 CCR8P51685 355 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 ARL4CP56559 192 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 SKP1P63208 163 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 MINDY4Q4G0A6 757 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 MFSD4BQ5TF39 518 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 STEAP4Q687X5 459 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 KLHL7Q8IXQ5 586 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 SIRT6Q8N6T7 355 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 MFSD9Q8NBP5 474 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 CATSPER1Q8NEC5 780 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 ABHD11Q8NFV4 315 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 VN1R1Q9GZP7 353 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 RNF32Q9H0A6 362 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 KCNF1Q9H3M0 494 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 CHMP2BQ9UQN3 213 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 SH2B3Q9UQQ2 575 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms