RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 HAS2Q92819 552 aa19.23■□□□□ 0.67
APP-215ENST00000474136 HDAC10Q969S8 669 aa19.23■□□□□ 0.67
APP-215ENST00000474136 IL17FQ96PD4 163 aa19.23■□□□□ 0.67
APP-215ENST00000474136 TTC1Q99614 292 aa19.23■□□□□ 0.67
APP-215ENST00000474136 TMEM109Q9BVC6 243 aa19.23■□□□□ 0.67
APP-215ENST00000474136 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.23■□□□□ 0.673e-6■□□□□ 9.5
APP-215ENST00000474136 ZFATQ9P243 1243 aa19.23■□□□□ 0.67
APP-215ENST00000474136 TXNDC16Q9P2K2 825 aa19.23■□□□□ 0.67
APP-215ENST00000474136 C3orf18Q9UK00 162 aa19.23■□□□□ 0.67
APP-215ENST00000474136 EXOC1LA0A1B0GW35 172 aa19.22■□□□□ 0.67
APP-215ENST00000474136 FAM159BA6NKW6 160 aa19.22■□□□□ 0.67
APP-215ENST00000474136 COX6A1P12074 109 aa19.22■□□□□ 0.67
APP-215ENST00000474136 SSTR2P30874 369 aa19.22■□□□□ 0.67
APP-215ENST00000474136 KIR3DL1P43629 444 aa19.22■□□□□ 0.67
APP-215ENST00000474136 CSE1LP55060 971 aaKnown RBP19.22■□□□□ 0.67
APP-215ENST00000474136 RASA2Q15283 850 aa19.22■□□□□ 0.67
APP-215ENST00000474136 AARS2Q5JTZ9 985 aaKnown RBP19.22■□□□□ 0.67
APP-215ENST00000474136 YOD1Q5VVQ6 348 aaPredicted RBP19.22■□□□□ 0.67
APP-215ENST00000474136 MRNIPQ6NTE8 343 aa19.22■□□□□ 0.67
APP-215ENST00000474136 NEPROQ6NW34 567 aa19.22■□□□□ 0.67
APP-215ENST00000474136 XKRXQ6PP77 449 aa19.22■□□□□ 0.67
APP-215ENST00000474136 FIGLAQ6QHK4 219 aa19.22■□□□□ 0.67
APP-215ENST00000474136 SPNS3Q6ZMD2 512 aa19.22■□□□□ 0.67
APP-215ENST00000474136 KIAA0408Q6ZU52 694 aa19.22■□□□□ 0.67
APP-215ENST00000474136 SDCCAG8Q86SQ7 713 aaPredicted RBP19.22■□□□□ 0.67
APP-215ENST00000474136 SLC26A11Q86WA9 606 aa19.22■□□□□ 0.67
APP-215ENST00000474136 TTC29Q8NA56 475 aaPredicted RBP19.22■□□□□ 0.67
APP-215ENST00000474136 OR4L1Q8NH43 312 aa19.22■□□□□ 0.67
APP-215ENST00000474136 ZNF285Q96NJ3 590 aa19.22■□□□□ 0.67
APP-215ENST00000474136 SELENOSQ9BQE4 189 aa19.22■□□□□ 0.67
APP-215ENST00000474136 MENTQ9BUN1 341 aa19.22■□□□□ 0.67
APP-215ENST00000474136 PLAC1Q9HBJ0 212 aa19.22■□□□□ 0.67
APP-215ENST00000474136 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.22■□□□□ 0.67
APP-215ENST00000474136 STOX2Q9P2F5 926 aaPredicted RBP19.22■□□□□ 0.67
APP-215ENST00000474136 SLC2A6Q9UGQ3 507 aa19.22■□□□□ 0.67
APP-215ENST00000474136 VPS9D1Q9Y2B5 631 aa19.22■□□□□ 0.67
APP-215ENST00000474136 NSG1A0A0A6YYJ2 146 aa19.21■□□□□ 0.67
APP-215ENST00000474136 RASAL1O95294 804 aa19.21■□□□□ 0.67
APP-215ENST00000474136 WDPCPO95876 746 aa19.21■□□□□ 0.67
APP-215ENST00000474136 ZGLP1P0C6A0 271 aa19.21■□□□□ 0.67
APP-215ENST00000474136 NSG1P42857 185 aa19.21■□□□□ 0.67
APP-215ENST00000474136 RAB28P51157 221 aa19.21■□□□□ 0.67
APP-215ENST00000474136 VSX2P58304 361 aaPredicted RBP19.21■□□□□ 0.67
APP-215ENST00000474136 PMP22Q01453 160 aa19.21■□□□□ 0.67
APP-215ENST00000474136 C3AR1Q16581 482 aa19.21■□□□□ 0.67
APP-215ENST00000474136 SYTL3Q4VX76 610 aa19.21■□□□□ 0.67
APP-215ENST00000474136 ZC3H12BQ5HYM0 836 aaKnown RBP19.21■□□□□ 0.67
APP-215ENST00000474136 LGSNQ5TDP6 509 aa19.21■□□□□ 0.67
APP-215ENST00000474136 LAPTM4BQ86VI4 370 aa19.21■□□□□ 0.67
APP-215ENST00000474136 RIBC1Q8N443 379 aaPredicted RBP19.21■□□□□ 0.67
APP-215ENST00000474136 MIEF2Q96C03 454 aa19.21■□□□□ 0.67
APP-215ENST00000474136 TCF12Q99081 682 aa19.21■□□□□ 0.67
APP-215ENST00000474136 TINAGQ9UJW2 476 aa19.21■□□□□ 0.67
APP-215ENST00000474136 FITM1A5D6W6 292 aa19.2■□□□□ 0.66
APP-215ENST00000474136 GOLGA6L10A6NI86 522 aa19.2■□□□□ 0.66
APP-215ENST00000474136 CTSVO60911 334 aa19.2■□□□□ 0.66
APP-215ENST00000474136 CRYABP02511 175 aaKnown RBP19.2■□□□□ 0.66
APP-215ENST00000474136 FTH1P02794 183 aa19.2■□□□□ 0.66
APP-215ENST00000474136 MSH2P43246 934 aa19.2■□□□□ 0.66
APP-215ENST00000474136 OCA2Q04671 838 aa19.2■□□□□ 0.66
APP-215ENST00000474136 EEF1A2Q05639 463 aaKnown RBP19.2■□□□□ 0.66
APP-215ENST00000474136 CACNG1Q06432 222 aa19.2■□□□□ 0.66
APP-215ENST00000474136 KBTBD12Q3ZCT8 623 aa19.2■□□□□ 0.66
APP-215ENST00000474136 FASTKD1Q53R41 847 aaKnown RBP19.2■□□□□ 0.66
APP-215ENST00000474136 TCTE1Q5JU00 501 aa19.2■□□□□ 0.66
APP-215ENST00000474136 WASHC2DQ5SRD0 308 aa19.2■□□□□ 0.66
APP-215ENST00000474136 TRMT10BQ6PF06 316 aaKnown RBP19.2■□□□□ 0.66
APP-215ENST00000474136 NDUFAF7Q7L592 441 aa19.2■□□□□ 0.66
APP-215ENST00000474136 GALNT7Q86SF2 657 aa19.2■□□□□ 0.66
APP-215ENST00000474136 CDH24Q86UP0 819 aa19.2■□□□□ 0.66
APP-215ENST00000474136 CNTN4Q8IWV2 1026 aa19.2■□□□□ 0.66
APP-215ENST00000474136 CTAGE3PQ8IX95 158 aa19.2■□□□□ 0.66
APP-215ENST00000474136 UHMK1Q8TAS1 419 aaKnown RBP19.2■□□□□ 0.66
APP-215ENST00000474136 POM121Q96HA1 1249 aa19.2■□□□□ 0.66
APP-215ENST00000474136 ZNF304Q9HCX3 659 aa19.2■□□□□ 0.66
APP-215ENST00000474136 IL1RAPL1Q9NZN1 696 aa19.2■□□□□ 0.66
APP-215ENST00000474136 CCDC162PA2VCL2 907 aa19.19■□□□□ 0.66
APP-215ENST00000474136 OR51F1A6NGY5 319 aa19.19■□□□□ 0.66
APP-215ENST00000474136 RASGRF2O14827 1237 aa19.19■□□□□ 0.66
APP-215ENST00000474136 CD3EAPO15446 510 aaKnown RBP19.19■□□□□ 0.66
APP-215ENST00000474136 NRP2O60462 931 aa19.19■□□□□ 0.66
APP-215ENST00000474136 SLC19A2O60779 497 aa19.19■□□□□ 0.66
APP-215ENST00000474136 CDH16O75309 829 aa19.19■□□□□ 0.66
APP-215ENST00000474136 SERPINA7P05543 415 aa19.19■□□□□ 0.66
APP-215ENST00000474136 ERVK-10P10266 1014 aa19.19■□□□□ 0.66
APP-215ENST00000474136 OGNP20774 298 aaKnown RBP19.19■□□□□ 0.66
APP-215ENST00000474136 CD9P21926 228 aa19.19■□□□□ 0.66
APP-215ENST00000474136 CNTFP26441 200 aa19.19■□□□□ 0.66
APP-215ENST00000474136 ARNTP27540 789 aa19.19■□□□□ 0.66
APP-215ENST00000474136 SF1Q15637 639 aaKnown RBP19.19■□□□□ 0.66
APP-215ENST00000474136 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.19■□□□□ 0.661e-7■■■□□ 19.2
APP-215ENST00000474136 FAM214AQ32MH5 1076 aa19.19■□□□□ 0.66
APP-215ENST00000474136 HSP90AA5PQ58FG0 334 aa19.19■□□□□ 0.66
APP-215ENST00000474136 TEDDM1Q5T9Z0 273 aa19.19■□□□□ 0.66
APP-215ENST00000474136 FRMPD2BQ6IN97 320 aa19.19■□□□□ 0.66
APP-215ENST00000474136 TAOK1Q7L7X3 1001 aa19.19■□□□□ 0.66
APP-215ENST00000474136 TDRPQ86YL5 185 aa19.19■□□□□ 0.66
APP-215ENST00000474136 VRK3Q8IV63 474 aa19.19■□□□□ 0.66
APP-215ENST00000474136 DNAJB8Q8NHS0 232 aa19.19■□□□□ 0.66
APP-215ENST00000474136 MTFMTQ96DP5 389 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms