RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 PRSS41Q7RTY9 318 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 CCDC25Q86WR0 208 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 OR11G2Q8NGC1 345 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 C8orf44Q96CB5 159 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 THAP11Q96EK4 314 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 RBBP8Q99708 897 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 CPNE1Q99829 537 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 UNKQ9C0B0 810 aaKnown RBP17.03■□□□□ 0.32
UPF3A-203ENST00000474056 POPDC3Q9HBV1 291 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 LUZP4Q9P127 313 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 C3orf18Q9UK00 162 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 PLAAQ9Y263 795 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 MAP4K5Q9Y4K4 846 aa17.03■□□□□ 0.32
UPF3A-203ENST00000474056 SORBS2O94875 1100 aaKnown RBP17.02■□□□□ 0.32
UPF3A-203ENST00000474056 WISP3O95389 354 aaPredicted RBP17.02■□□□□ 0.32
UPF3A-203ENST00000474056 IL1RNP18510 177 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 ITGA3P26006 1051 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 GRK3P35626 688 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 CD97P48960 835 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 SLC12A2P55011 1212 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 SOX8P57073 446 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 MAT1AQ00266 395 aaKnown RBP17.02■□□□□ 0.32
UPF3A-203ENST00000474056 POU4F1Q01851 419 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 TSNQ15631 228 aaKnown RBP17.02■□□□□ 0.32
UPF3A-203ENST00000474056 CATSPEREQ5SY80 951 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 JMJD6Q6NYC1 403 aaPredicted RBP17.02■□□□□ 0.32
UPF3A-203ENST00000474056 CYS1Q717R9 158 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 ASPGQ86U10 573 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 HPS6Q86YV9 775 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 SHISA5Q8N114 240 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 KCT2Q8NC54 265 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 CAMKVQ8NCB2 501 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 ABHD11Q8NFV4 315 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 OR9A4Q8NGU2 314 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 ZCCHC10Q8TBK6 192 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 ANKRD7Q92527 254 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 MIB2Q96AX9 1013 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 TM4SF19Q96DZ7 209 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 TSNARE1Q96NA8 513 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 GPR22Q99680 433 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 SPNS1Q9H2V7 528 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 MKKSQ9NPJ1 570 aaPredicted RBP17.02■□□□□ 0.32
UPF3A-203ENST00000474056 C14orf105Q9NVL8 296 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 C5AR2Q9P296 337 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 OARD1Q9Y530 152 aa17.02■□□□□ 0.32
UPF3A-203ENST00000474056 DOPEY2Q9Y3R5 2298 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 CPAMD8Q8IZJ3 1885 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 RP1L1Q8IWN7 2480 aaPredicted RBP17.01■□□□□ 0.31
UPF3A-203ENST00000474056 TTLL8A6PVC2 850 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 IDSB3KWA1 339 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 MAP2K7O14733 419 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 PHGDHO43175 533 aaKnown RBP17.01■□□□□ 0.31
UPF3A-203ENST00000474056 URI1O94763 535 aaPredicted RBP17.01■□□□□ 0.31
UPF3A-203ENST00000474056 NSA2O95478 260 aaKnown RBP17.01■□□□□ 0.31
UPF3A-203ENST00000474056 GSTA2P09210 222 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 GP5P40197 560 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 MAGEA4P43358 317 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 AVPR1BP47901 424 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 CCR8P51685 355 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 CDKL1Q00532 357 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 KBTBD12Q3ZCT8 623 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 SLC6A19Q695T7 634 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 TMEM214Q6NUQ4 689 aaKnown RBP17.01■□□□□ 0.31
UPF3A-203ENST00000474056 C8orf74Q6P047 294 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 ZC3H7AQ8IWR0 971 aaKnown RBP17.01■□□□□ 0.31
UPF3A-203ENST00000474056 CTAGE3PQ8IX95 158 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 Q8NA96 180 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 MFSD9Q8NBP5 474 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 OR4K1Q8NGD4 311 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 SLC13A3Q8WWT9 602 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 SLC5A11Q8WWX8 675 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 NEIL2Q969S2 332 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 EGFL8Q99944 293 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 LRRC1Q9BTT6 524 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 SARGQ9BW04 601 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 TGIF2Q9GZN2 237 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 DERL2Q9GZP9 239 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 ZBTB20Q9HC78 741 aaPredicted RBP17.01■□□□□ 0.31
UPF3A-203ENST00000474056 LRRC4CQ9HCJ2 640 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 TXNDC16Q9P2K2 825 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 CTNNAL1Q9UBT7 734 aa17.01■□□□□ 0.31
UPF3A-203ENST00000474056 ESPL1Q14674 2120 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 FAM155BO75949 473 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 UBR5O95071 2799 aaPredicted RBP17■□□□□ 0.31
UPF3A-203ENST00000474056 ACPPP15309 386 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 EFNA3P52797 238 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 EMP2P54851 167 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 Q0VFX4 171 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 ILF2Q12905 390 aaKnown RBP17■□□□□ 0.31
UPF3A-203ENST00000474056 USP10Q14694 798 aaKnown RBP17■□□□□ 0.31
UPF3A-203ENST00000474056 C18orf21Q32NC0 220 aaPredicted RBP17■□□□□ 0.31
UPF3A-203ENST00000474056 ATG9BQ674R7 924 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 FAAH2Q6GMR7 532 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 FRA10AC1Q70Z53 315 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 ADAMTSL2Q86TH1 951 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 THOC6Q86W42 341 aaKnown RBP17■□□□□ 0.31
UPF3A-203ENST00000474056 PARP9Q8IXQ6 854 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 SPATA6LQ8N4H0 392 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 ZNF740Q8NDX6 193 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 CPT1CQ8TCG5 803 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms