RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PHACTR4Q8IZ21 702 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 TCEAL2Q9H3H9 227 aaPredicted RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 EXO1Q9UQ84 846 aaKnown RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 TRBV5-3A0A0A0MS03 114 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 GNG14A0A1W2PPG7 69 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 MAN2B1O00754 1011 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 LAMP1P11279 417 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 COX7A2P14406 83 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 HOXB3P14651 431 aaPredicted RBP17.29■□□□□ 0.36
VARS2-206ENST00000473916 FOSL2P15408 326 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 PRPS1L1P21108 318 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 HRH2P25021 359 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 PEBP1P30086 187 aaKnown RBP17.29■□□□□ 0.36
VARS2-206ENST00000473916 OXTRP30559 389 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 WNT3P56703 355 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 SRP54P61011 504 aaKnown RBP17.29■□□□□ 0.36
VARS2-206ENST00000473916 LEXMQ3ZCV2 418 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 SPIN4Q56A73 249 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 ZFP1Q6P2D0 407 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 OR2A1Q8NGT9 310 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 CANT1Q8WVQ1 401 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 LRGUKQ96M69 825 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 GUCD1Q96NT3 240 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 WASH6PQ9NQA3 447 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 SPHK1Q9NYA1 384 aa17.29■□□□□ 0.36
VARS2-206ENST00000473916 APBB3O95704 486 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 IGLV3-19P01714 112 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 STATHP02808 62 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 PIM1P11309 404 aaPredicted RBP17.28■□□□□ 0.36
VARS2-206ENST00000473916 HOXB9P17482 250 aaPredicted RBP17.28■□□□□ 0.36
VARS2-206ENST00000473916 HTR1BP28222 390 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 HSD17B2P37059 387 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 ACTR1BP42025 376 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 ACTR1AP61163 376 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 BNIP2Q12982 314 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 MTAPQ13126 283 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 LAPTM5Q13571 262 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 ZNF542PQ5EBM4 170 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 ICE2Q659A1 982 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 LCN8Q6JVE9 175 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 SFTPA2Q8IWL1 248 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 CLECL1Q8IZS7 167 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 ABHD11Q8NFV4 315 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 ZNF583Q96ND8 569 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 PRDM6Q9NQX0 595 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 ACTR3BQ9P1U1 418 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 ZNF624Q9P2J8 865 aaPredicted RBP17.28■□□□□ 0.36
VARS2-206ENST00000473916 LAMA1P25391 3075 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 C15orf38-AP3S2A0A0A6YYH1 394 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 KCNJ13O60928 360 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 SCN2BO60939 215 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 MYO1DO94832 1006 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 KIR3DL1P43629 444 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 CYP4F3Q08477 520 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 SLC14A1Q13336 389 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 SFT2D3Q587I9 215 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 RUNDC3AQ59EK9 446 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 KIAA0895LQ68EN5 471 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 ARPINQ7Z6K5 226 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 GPR180Q86V85 440 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 PTRH1Q86Y79 214 aaKnown RBP17.28■□□□□ 0.36
VARS2-206ENST00000473916 NRROSQ86YC3 692 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 KRT78Q8N1N4 520 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 DEFB119Q8N690 84 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 TSTD1Q8NFU3 115 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 OR8J3Q8NGG0 315 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 OR2L8Q8NGY9 312 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 OR10A6Q8NH74 314 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 THUMPD3Q9BV44 507 aaKnown RBP17.28■□□□□ 0.36
VARS2-206ENST00000473916 PELI2Q9HAT8 420 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 KLF15Q9UIH9 416 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 MAN2B2Q9Y2E5 1009 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 AP4S1Q9Y587 144 aa17.28■□□□□ 0.36
VARS2-206ENST00000473916 GABRR3A8MPY1 467 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 CASQ2O14958 399 aaPredicted RBP17.27■□□□□ 0.36
VARS2-206ENST00000473916 SCAMP2O15127 329 aaKnown RBP17.27■□□□□ 0.36
VARS2-206ENST00000473916 LCMT2O60294 686 aaKnown RBP17.27■□□□□ 0.36
VARS2-206ENST00000473916 CELA2BP08218 269 aaPredicted RBP17.27■□□□□ 0.36
VARS2-206ENST00000473916 PIK3CBP42338 1070 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 CCR8P51685 355 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 REEP5Q00765 189 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 MC1RQ01726 317 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 ADCK2Q7Z695 626 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 MMP21Q8N119 569 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 LRTOMTQ8WZ04 291 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 SNX19Q92543 992 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 ZUFSPQ96AP4 578 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 TBCDQ9BTW9 1192 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 KCNH6Q9H252 994 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 SEMA6AQ9H2E6 1030 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 RPF2Q9H7B2 306 aaKnown RBP17.27■□□□□ 0.36
VARS2-206ENST00000473916 MVB12BQ9H7P6 319 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 WSB2Q9NYS7 404 aaPredicted RBP17.27■□□□□ 0.36
VARS2-206ENST00000473916 C6orf203Q9P0P8 240 aaPredicted RBP17.27■□□□□ 0.36
VARS2-206ENST00000473916 INVSQ9Y283 1065 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 KLHL20Q9Y2M5 609 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 SNX13Q9Y5W8 968 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 AK5Q9Y6K8 562 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 V9GYQ6 96 aa17.27■□□□□ 0.36
VARS2-206ENST00000473916 A0A096LPI6 279 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms