RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 A0A087WUV0 522 aaPredicted RBP18.01■□□□□ 0.47
PTCD3-210ENST00000473829 ARGFXA6NJG6 315 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 EIF4E1BA6NMX2 242 aaKnown RBP18.01■□□□□ 0.47
PTCD3-210ENST00000473829 POC1B-GALNT4F8VUJ3 575 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 INHBAP08476 426 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 SERPINB8P50452 374 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 REEP5Q00765 189 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 ATP1A4Q13733 1029 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 GARNL3Q5VVW2 1013 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 PRMT9Q6P2P2 845 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 SHISA6Q6ZSJ9 500 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 PRSS41Q7RTY9 318 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 MRGPREQ86SM8 312 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 SHISA5Q8N114 240 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 AMER3Q8N944 861 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 MFSD9Q8NBP5 474 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 COL26A1Q96A83 441 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 THAP11Q96EK4 314 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 MOCOSQ96EN8 888 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 ATOH8Q96SQ7 321 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 SARGQ9BW04 601 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 ADNPQ9H2P0 1102 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 EPB41L4BQ9H329 900 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 NMRAL1Q9HBL8 299 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 WWOXQ9NZC7 414 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 CD274Q9NZQ7 290 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 DYRK1BQ9Y463 629 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 ASB1Q9Y576 335 aa18.01■□□□□ 0.47
PTCD3-210ENST00000473829 TLN1Q9Y490 2541 aaKnown RBP18.01■□□□□ 0.47
PTCD3-210ENST00000473829 COL6A6A6NMZ7 2263 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 A0A087X1B8 175 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 A0A096LPK6 155 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 A0A0A6YYC8 382 aaPredicted RBP18■□□□□ 0.47
PTCD3-210ENST00000473829 TRBC2A0A5B9 178 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 VSTM2BA6NLU5 285 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 I3L1I5 382 aaPredicted RBP18■□□□□ 0.47
PTCD3-210ENST00000473829 UBXN8O00124 270 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 TXNDC9O14530 226 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 RIPK2O43353 540 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 KERAO60938 352 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 ALBP02768 609 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 ABHD2P08910 425 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 PIM1P11309 404 aaPredicted RBP18■□□□□ 0.47
PTCD3-210ENST00000473829 FBLP22087 321 aaKnown RBP18■□□□□ 0.47
PTCD3-210ENST00000473829 VARSP26640 1264 aaKnown RBP18■□□□□ 0.47
PTCD3-210ENST00000473829 GCAP28676 217 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 GRK3P35626 688 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 GGT5P36269 586 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 SLC26A3P40879 764 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 MAGEA12P43365 314 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 HSPA7P48741 367 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 NXPE4Q6UWF7 544 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 PPP1R32Q7Z5V6 425 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 ASPGQ86U10 573 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 APLFQ8IW19 511 aaPredicted RBP18■□□□□ 0.47
PTCD3-210ENST00000473829 KCT2Q8NC54 265 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 ISL2Q96A47 359 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 MVB12AQ96EY5 273 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 DRC3Q9H069 523 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 SOX17Q9H6I2 414 aaPredicted RBP18■□□□□ 0.47
PTCD3-210ENST00000473829 WDR54Q9H977 334 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 PELI2Q9HAT8 420 aa18■□□□□ 0.47
PTCD3-210ENST00000473829 PTBP2Q9UKA9 531 aaKnown RBP18■□□□□ 0.47
PTCD3-210ENST00000473829 OR1F1O43749 312 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 ZNF500O60304 480 aaPredicted RBP17.99■□□□□ 0.47
PTCD3-210ENST00000473829 PRAMEF4O60810 478 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 TYK2P29597 1187 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 GLRBP48167 497 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 DSG2Q14126 1118 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 SSPNQ14714 243 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 SYT16Q17RD7 645 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 CDKL4Q5MAI5 379 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 PRAMEF9Q5VWM5 478 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 SULT1C3Q6IMI6 304 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 TMEM214Q6NUQ4 689 aaKnown RBP17.99■□□□□ 0.47
PTCD3-210ENST00000473829 SLCO4C1Q6ZQN7 724 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 TRMT10CQ7L0Y3 403 aaKnown RBP17.99■□□□□ 0.47
PTCD3-210ENST00000473829 RAB43Q86YS6 212 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 PLD6Q8N2A8 252 aaKnown RBP17.99■□□□□ 0.47
PTCD3-210ENST00000473829 TCAIMQ8N3R3 496 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 ANKRD53Q8N9V6 530 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 OR9A4Q8NGU2 314 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 ZCCHC10Q8TBK6 192 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 STAG3L4Q8TBR4 150 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 SLC13A3Q8WWT9 602 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 MMABQ96EY8 250 aaPredicted RBP17.99■□□□□ 0.47
PTCD3-210ENST00000473829 GPR78Q96P69 363 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 MESP1Q9BRJ9 268 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 NUDT4Q9NZJ9 180 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 TUBD1Q9UJT1 453 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 ZNF180Q9UJW8 692 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 TLK1Q9UKI8 766 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 KCNE2Q9Y6J6 123 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 SCN3AQ9NY46 2000 aa17.99■□□□□ 0.47
PTCD3-210ENST00000473829 IGLV3-12A0A075B6K2 115 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 EXOC1LA0A1B0GW35 172 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 SUPT3HB4E1H0 165 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 K7EM74 188 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 MASP2O00187 686 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 SUPT3HO75486 399 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms