RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-210	ENST00000473311	PLD1	Q13393	1074 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	KEAP1	Q14145	624 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	SNAP47	Q5SQN1	464 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	KDM4D	Q6B0I6	523 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	METTL2B	Q6P1Q9	378 aa	Known RBP	13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	MACC1	Q6ZN28	852 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	OR6F1	Q8NGZ6	308 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	WFDC5	Q8TCV5	224 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	HTRA1	Q92743	480 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	PYCR2	Q96C36	320 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	METTL2A	Q96IZ6	378 aa	Known RBP	13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	APOL4	Q9BPW4	351 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	ACAT2	Q9BWD1	397 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	TM9SF3	Q9HD45	589 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	RASSF1	Q9NS23	344 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	SNX6	Q9UNH7	406 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	RGS10	O43665	173 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	JUND	P17535	347 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	EPHA2	P29317	976 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	SPAM1	P38567	509 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	FCGRT	P55899	365 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	PRKCZ	Q05513	592 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	LYPLAL1	Q5VWZ2	237 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	VTCN1	Q7Z7D3	282 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	FAM9C	Q8IZT9	166 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	NXPE1	Q8N323	547 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	POC5	Q8NA72	575 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	ATG16L2	Q8NAA4	619 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	APIP	Q96GX9	242 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	ALOXE3	Q9BYJ1	711 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	ASPSCR1	Q9BZE9	553 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	GABARAPL1	Q9H0R8	117 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	VPS4A	Q9UN37	437 aa		13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.55	□□□□□ -0.24
ABCF3-210	ENST00000473311	FABP3	P05413	133 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	ELN	P15502	786 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	HMGA1	P17096	107 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	HOXB9	P17482	250 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	MAPK1	P28482	360 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	DNAJA1	P31689	397 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	EIF2D	P41214	584 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	KIR3DL1	P43629	444 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	ACLY	P53396	1101 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	VLDLR	P98155	873 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	MAPK11	Q15759	364 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	ZNF783	Q6ZMS7	281 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	UBE2R2	Q712K3	238 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	LYSMD2	Q8IV50	215 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	OVCA2	Q8WZ82	227 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	PIK3R3	Q92569	461 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	NELL1	Q92832	810 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	TESC	Q96BS2	214 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	YIPF6	Q96EC8	236 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	PANX1	Q96RD7	426 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	KCTD5	Q9NXV2	234 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	LRFN2	Q9ULH4	789 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	CFL2	Q9Y281	166 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	CLIC1	O00299	241 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	APOA1	P02647	267 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	GALT	P07902	379 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	FPR1	P21462	350 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	CST5	P28325	142 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	CXCR4	P61073	352 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	SMAD3	P84022	425 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	GBX1	Q14549	363 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	SYT6	Q5T7P8	510 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	TSPAN33	Q86UF1	283 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	CDC26	Q8NHZ8	85 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	ZNF300	Q96RE9	604 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	KLF16	Q9BXK1	252 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	EBPL	Q9BY08	206 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	KRT84	Q9NSB2	600 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	HECA	Q9UBI9	543 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	HSPE1-MOB4	S4R3N1	261 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	SCN8A	Q9UQD0	1980 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311		A0A1W2PQ72	361 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	ACVR2A	P27037	513 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	DEFA1	P59665	94 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	DEFA3	P59666	94 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	VMAC	Q2NL98	169 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	GPR33	Q49SQ1	333 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	FAM205BP	Q63HN1	556 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	ZNF621	Q6ZSS3	439 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	RNF175	Q8N4F7	328 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	GALNT11	Q8NCW6	608 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	DYNC2LI1	Q8TCX1	351 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	RPL3L	Q92901	407 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	CMTM7	Q96FZ5	175 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	REXO4	Q9GZR2	422 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	RPS6KA6	Q9UK32	745 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	ERVW-1	Q9UQF0	538 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	PMF1-BGLAP	U3KQ54	211 aa		13.54	□□□□□ -0.24
ABCF3-210	ENST00000473311	PABPN1L	A6NDY0	278 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	FPGT	O14772	594 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	KCNK2	O95069	426 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	ENG	P17813	658 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	DDOST	P39656	456 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms