RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CRYMQ14894 314 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 ABHD17BQ5VST6 288 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 VN1R4Q7Z5H5 301 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 C17orf64Q86WR6 236 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 MYO1HQ8N1T3 1032 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 SUN3Q8TAQ9 357 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 NR4A3Q92570 626 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 THAP11Q96EK4 314 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 VN1R1Q9GZP7 353 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 RNF32Q9H0A6 362 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 TAS2R13Q9NYV9 303 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 HCN3Q9P1Z3 774 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 TEKT2Q9UIF3 430 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 ADAMTS6Q9UKP5 1117 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 NOTCH2Q04721 2471 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 CROCCQ5TZA2 2017 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 POLEQ07864 2286 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 KCNE1BA0A087WTH5 132 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 A0A1B0GUH1 482 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 PABPN1LA6NDY0 278 aaKnown RBP18.69■□□□□ 0.58
COL9A3-210ENST00000472880 SEC24DO94855 1032 aaPredicted RBP18.69■□□□□ 0.58
COL9A3-210ENST00000472880 WDPCPO95876 746 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 STSP08842 583 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 IL1RNP18510 177 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 EFNA3P52797 238 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 SNRPNP63162 240 aaKnown RBP18.69■□□□□ 0.58
COL9A3-210ENST00000472880 ZNF33BQ06732 778 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 PPP1R7Q15435 360 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 AGTRAPQ6RW13 159 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 MBOAT1Q6ZNC8 495 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 PRSS41Q7RTY9 318 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 CAMKVQ8NCB2 501 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 C2CD4AQ8NCU7 369 aaPredicted RBP18.69■□□□□ 0.58
COL9A3-210ENST00000472880 OR51Q1Q8NH59 317 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 ZCCHC10Q8TBK6 192 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 EEF1AKMT1Q8WVE0 214 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 ALKBH8Q96BT7 664 aaKnown RBP18.69■□□□□ 0.58
COL9A3-210ENST00000472880 TAAR6Q96RI8 345 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 PARVBQ9HBI1 364 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 ANKHQ9HCJ1 492 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 PDE10AQ9Y233 779 aa18.69■□□□□ 0.58
COL9A3-210ENST00000472880 CNTRLQ7Z7A1 2325 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 MYBL2P10244 700 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 CCND1P24385 295 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 GRK3P35626 688 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 XCR1P46094 333 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 TDGF1P3P51864 188 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 CSNK1G2P78368 415 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 ZRSR2Q15696 482 aaKnown RBP18.68■□□□□ 0.58
COL9A3-210ENST00000472880 BTBD16Q32M84 506 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 RNASEH2BQ5TBB1 312 aaKnown RBP18.68■□□□□ 0.58
COL9A3-210ENST00000472880 C1QL3Q5VWW1 255 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 ZNF324BQ6AW86 544 aaPredicted RBP18.68■□□□□ 0.58
COL9A3-210ENST00000472880 TMEM214Q6NUQ4 689 aaKnown RBP18.68■□□□□ 0.58
COL9A3-210ENST00000472880 LANCL3Q6ZV70 420 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 CPEB2Q7Z5Q1 589 aaKnown RBP18.68■□□□□ 0.58
COL9A3-210ENST00000472880 ASPGQ86U10 573 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 FJX1Q86VR8 437 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 IMMP1LQ96LU5 166 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 MACROD1Q9BQ69 325 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 ATG10Q9H0Y0 220 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 KCNF1Q9H3M0 494 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 SH2B3Q9UQQ2 575 aa18.68■□□□□ 0.58
COL9A3-210ENST00000472880 IGHV3-20A0A0C4DH32 117 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 FEZF1A0PJY2 475 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 OR5H15A6NDH6 313 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 SGK494L7N484 410 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 SLC16A5O15375 505 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 ZG16O60844 167 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 RASAL1O95294 804 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 TTC4O95801 387 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 HIST1H2AGP0C0S8 130 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-210ENST00000472880 SLC35G6P0C7Q6 338 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 HIST1H2ADP20671 130 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 BCL6P41182 706 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 KCNK10P57789 538 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 NAE1Q13564 534 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 GFRALQ6UXV0 394 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 ANP32BQ92688 251 aaKnown RBP18.67■□□□□ 0.58
COL9A3-210ENST00000472880 LINGO1Q96FE5 620 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 HIST1H2AHQ96KK5 128 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 OSBPL9Q96SU4 736 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 CYTH2Q99418 400 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 HIST1H2AJQ99878 128 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 H2AFJQ9BTM1 129 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 FAM129AQ9BZQ8 928 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 ASIC3Q9UHC3 531 aa18.67■□□□□ 0.58
COL9A3-210ENST00000472880 A8MUI8 341 aa18.66■□□□□ 0.58
COL9A3-210ENST00000472880 PRAMEF2O60811 474 aa18.66■□□□□ 0.58
COL9A3-210ENST00000472880 CRYABP02511 175 aaKnown RBP18.66■□□□□ 0.58
COL9A3-210ENST00000472880 CDH1P12830 882 aa18.66■□□□□ 0.58
COL9A3-210ENST00000472880 AGTR2P50052 363 aa18.66■□□□□ 0.58
COL9A3-210ENST00000472880 DHX9Q08211 1270 aaKnown RBP18.66■□□□□ 0.58
COL9A3-210ENST00000472880 SPANXN3Q5MJ09 141 aa18.66■□□□□ 0.58
COL9A3-210ENST00000472880 RBM20Q5T481 1227 aaKnown RBP18.66■□□□□ 0.58
COL9A3-210ENST00000472880 PLAG1Q6DJT9 500 aa18.66■□□□□ 0.58
COL9A3-210ENST00000472880 CAPN13Q6MZZ7 669 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-210ENST00000472880 PAQR3Q6TCH7 311 aa18.66■□□□□ 0.58
COL9A3-210ENST00000472880 LCTLQ6UWM7 567 aa18.66■□□□□ 0.58
COL9A3-210ENST00000472880 SLC34A3Q8N130 599 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms