RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 LOC102723532A0A0G2JNH3 316 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 HDAC3O15379 428 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 ULK1O75385 1050 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 KRT6AP02538 564 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 KRT6BP04259 564 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 CXCR2P25025 360 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 GRK3P35626 688 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 KRT6CP48668 564 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 AQP5P55064 265 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 IFT88Q13099 833 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 KCNAB1Q14722 419 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 PRSS42Q7Z5A4 293 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 CPLX4Q7Z7G2 160 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 B3GNT8Q7Z7M8 397 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 DDIASQ8IXT1 998 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 OR4N4Q8N0Y3 316 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 DNAJC22Q8N4W6 341 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 CCDC74BQ96LY2 380 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 MAGEB10Q96LZ2 347 aaPredicted RBP18.38■□□□□ 0.53
PSPC1-203ENST00000471658 NT5DC2Q9H857 520 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 KCNK13Q9HB14 408 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 PRM3Q9NNZ6 103 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 SOHLH2Q9NX45 425 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 PDP2Q9P2J9 529 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 GIMAP2Q9UG22 337 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 SPAARA0A1B0GVQ0 90 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 D6RAR5 112 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 TM4SF5O14894 197 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 HGSO14964 777 aaPredicted RBP18.37■□□□□ 0.53
PSPC1-203ENST00000471658 RFPL3O75679 317 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 TGDSO95455 350 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 ZBTB11O95625 1053 aaPredicted RBP18.37■□□□□ 0.53
PSPC1-203ENST00000471658 THRAP10827 490 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 SPIDRQ14159 915 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 SLC9B1Q4ZJI4 515 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 RNF44Q7L0R7 432 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 ARHGAP22Q7Z5H3 698 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 SLCO6A1Q86UG4 719 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 SLITRK4Q8IW52 837 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 MFSD9Q8NBP5 474 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 ZNF473Q8WTR7 871 aaKnown RBP18.37■□□□□ 0.53
PSPC1-203ENST00000471658 KLHL6Q8WZ60 621 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 TCTN2Q96GX1 697 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 FAR2Q96K12 515 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 OR2A5Q96R48 311 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 CCT8L2Q96SF2 557 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 SARGQ9BW04 601 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 TRIM55Q9BYV6 548 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 RHBGQ9H310 441 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 WDR55Q9H6Y2 383 aaPredicted RBP18.37■□□□□ 0.53
PSPC1-203ENST00000471658 PCDHGA4Q9Y5G9 962 aa18.37■□□□□ 0.53
PSPC1-203ENST00000471658 GOLGA8QA0A0J9YX86 632 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 ATP6AP2A0A1C7CYW4 349 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 GOLGA8OA6NCC3 632 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 MAGEB17A8MXT2 336 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 GOLGA8NF8WBI6 632 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 ATP6AP2O75787 350 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 ETHE1O95571 254 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 TBX6O95947 436 aaPredicted RBP18.36■□□□□ 0.53
PSPC1-203ENST00000471658 CHEK2O96017 543 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 TGFB1P01137 390 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 SERPIND1P05546 499 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 EZRP15311 586 aaKnown RBP18.36■□□□□ 0.53
PSPC1-203ENST00000471658 RPS13P62277 151 aaKnown RBP18.36■□□□□ 0.53
PSPC1-203ENST00000471658 HMGCS1Q01581 520 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 Q6ZSR9 355 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 DGLUCYQ7Z3D6 616 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 VN1R4Q7Z5H5 301 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 GLRX5Q86SX6 157 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 AFAP1L2Q8N4X5 818 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 OR2T11Q8NH01 316 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 CREB3L4Q8TEY5 395 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 UBE2E3Q969T4 207 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 ZFYVE21Q9BQ24 234 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 EBF4Q9BQW3 602 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 PITHD1Q9GZP4 211 aaPredicted RBP18.36■□□□□ 0.53
PSPC1-203ENST00000471658 PDE7BQ9NP56 450 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 VTI1BQ9UEU0 232 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 GVINP1Q7Z2Y8 2422 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 FAM186AA6NE01 2351 aa18.36■□□□□ 0.53
PSPC1-203ENST00000471658 ANKDD1BA6NHY2 528 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 SLCO1B7G3V0H7 640 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 SDHDO14521 159 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 TROVE2P10155 538 aaKnown RBP eCLIP18.35■□□□□ 0.53
PSPC1-203ENST00000471658 ALOX15P16050 662 aaPredicted RBP18.35■□□□□ 0.53
PSPC1-203ENST00000471658 MLLT3P42568 568 aaPredicted RBP18.35■□□□□ 0.53
PSPC1-203ENST00000471658 GABRA4P48169 554 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 PDX1P52945 283 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 RPS15AP62244 130 aaKnown RBP18.35■□□□□ 0.53
PSPC1-203ENST00000471658 INSM1Q01101 510 aaPredicted RBP18.35■□□□□ 0.53
PSPC1-203ENST00000471658 NAA25Q14CX7 972 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 PHF19Q5T6S3 580 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 EPGNQ6UW88 154 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 MCATQ8IVS2 390 aaKnown RBP18.35■□□□□ 0.53
PSPC1-203ENST00000471658 NETO1Q8TDF5 533 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 CCT6BQ92526 530 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 REPS1Q96D71 796 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 C19orf60Q96EN9 201 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 SLC41A2Q96JW4 573 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 DPYSL5Q9BPU6 564 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms