RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 MAP10Q9P2G4 905 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 CIDEBQ9UHD4 219 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 SUFUQ9UMX1 484 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 GPSM3Q9Y4H4 160 aa16.84■□□□□ 0.29
HSPG2-208ENST00000471322 ANKRD28O15084 1053 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 PCDHGA12O60330 932 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 FUCA1P04066 466 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 CSF2P04141 144 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 CELA2BP08218 269 aaPredicted RBP16.83■□□□□ 0.28
HSPG2-208ENST00000471322 ZNF883P0CG24 379 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 C1GALT1C1LP0DN25 315 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 ERGP11308 486 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 NOVA1P51513 510 aaKnown RBP16.83■□□□□ 0.28
HSPG2-208ENST00000471322 AP2B1P63010 937 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 CTBSQ01459 385 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 CYP2A13Q16696 494 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 ALG11Q2TAA5 492 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 PRRT3Q5FWE3 981 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 MED27Q6P2C8 311 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 LCTLQ6UWM7 567 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 PIP4P1Q86T03 277 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 RETREG3Q86VR2 466 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 EID2Q8N6I1 236 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 SLC5A11Q8WWX8 675 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 OR1E3Q8WZA6 343 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 NEIL2Q969S2 332 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 TEX37Q96LM6 180 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 WDR92Q96MX6 357 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 GPATCH1Q9BRR8 931 aaKnown RBP16.83■□□□□ 0.28
HSPG2-208ENST00000471322 DPY30Q9C005 99 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 NMRK1Q9NWW6 199 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 TMEM181Q9P2C4 612 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 STX18Q9P2W9 335 aaKnown RBP16.83■□□□□ 0.28
HSPG2-208ENST00000471322 STOML1Q9UBI4 398 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 VPS29Q9UBQ0 182 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 APOBEC3BQ9UH17 382 aaKnown RBP16.83■□□□□ 0.28
HSPG2-208ENST00000471322 PSMD13Q9UNM6 376 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 TDRKHQ9Y2W6 561 aaKnown RBP16.83■□□□□ 0.28
HSPG2-208ENST00000471322 PCNX2A6NKB5 2137 aa16.83■□□□□ 0.28
HSPG2-208ENST00000471322 SPAARA0A1B0GVQ0 90 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 PRR19A6NJB7 356 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 TNFRSF10CO14798 259 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 PIAS2O75928 621 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 NME1P15531 152 aaKnown RBP16.82■□□□□ 0.28
HSPG2-208ENST00000471322 CD22P20273 847 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 VARSP26640 1264 aaKnown RBP16.82■□□□□ 0.28
HSPG2-208ENST00000471322 ZFP36L2P47974 494 aaKnown RBP16.82■□□□□ 0.28
HSPG2-208ENST00000471322 SRP54P61011 504 aaKnown RBP16.82■□□□□ 0.28
HSPG2-208ENST00000471322 CEACAM7Q14002 265 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 SUZ12Q15022 739 aaKnown RBP16.82■□□□□ 0.28
HSPG2-208ENST00000471322 RCN1Q15293 331 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 TLR1Q15399 786 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 THEMIS2Q5TEJ8 643 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 NXPE4Q6UWF7 544 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 DGLUCYQ7Z3D6 616 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 PHACTR4Q8IZ21 702 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 LIX1Q8N485 282 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 DPP10Q8N608 796 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 LMX1AQ8TE12 382 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 LRRC58Q96CX6 371 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 OR2M4Q96R27 311 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 OSGEPL1Q9H4B0 414 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 MVB12BQ9H7P6 319 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 SUCOQ9UBS9 1254 aaKnown RBP16.82■□□□□ 0.28
HSPG2-208ENST00000471322 NKX1-2Q9UD57 310 aaPredicted RBP16.82■□□□□ 0.28
HSPG2-208ENST00000471322 PCOLCE2Q9UKZ9 415 aa16.82■□□□□ 0.28
HSPG2-208ENST00000471322 PRSS38A1L453 326 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 FLRT2O43155 660 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 KDM1AO60341 852 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 KRT36O76013 467 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 IL6P05231 212 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 BCKDHAP12694 445 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 IL12AP29459 219 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 CLNS1AP54105 237 aaKnown RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 HNRNPKP61978 463 aaKnown RBP eCLIP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 TSTA3Q13630 321 aaPredicted RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 NFYCQ13952 458 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 PRAMEF13Q5VWM6 474 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 TMPRSS11BQ86T26 416 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 EFCAB3Q8N7B9 438 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 ZNF548Q8NEK5 533 aaPredicted RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 OR7G3Q8NG95 312 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 SMPDL3AQ92484 453 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 C12orf66Q96MD2 445 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 FERD3LQ96RJ6 166 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 RAB11FIP5Q9BXF6 653 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 ACTL8Q9H568 366 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 ANGPTL2Q9UKU9 493 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 TSC22D4Q9Y3Q8 395 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 HEBP2Q9Y5Z4 205 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 ARID1BQ8NFD5 2236 aaPredicted RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 NCOR2Q9Y618 2525 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 C15orf38-AP3S2A0A0A6YYH1 394 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 H0Y3Z8 333 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 FOXE1O00358 373 aaPredicted RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 CACNA1AO00555 2505 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 MYO1DO94832 1006 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 KCNK5O95279 499 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 MYF5P13349 255 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 AMD1P17707 334 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms