RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 KLC1Q07866 573 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 RAPSNQ13702 412 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 DSG2Q14126 1118 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 FRG1Q14331 258 aaKnown RBP12.85□□□□□ -0.35
HMGN1-211ENST00000471260 RBBP7Q16576 425 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 NDUFA9Q16795 377 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 THEMIS2Q5TEJ8 643 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 IRAK1BP1Q5VVH5 260 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 C6orf89Q6UWU4 347 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 RELL1Q8IUW5 271 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 RIBC1Q8N443 379 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-211ENST00000471260 PPFIBP2Q8ND30 876 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 THAP11Q96EK4 314 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 CERS2Q96G23 380 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 SNF8Q96H20 258 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 C10orf90Q96M02 699 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 CRB3Q9BUF7 120 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 SLC29A3Q9BZD2 475 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 TGIF2Q9GZN2 237 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 SOX17Q9H6I2 414 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-211ENST00000471260 PARVBQ9HBI1 364 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 CCDC177Q9NQR7 707 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-211ENST00000471260 C14orf105Q9NVL8 296 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 NOVA2Q9UNW9 492 aaKnown RBP12.85□□□□□ -0.35
HMGN1-211ENST00000471260 RUVBL1Q9Y265 456 aaKnown RBP12.85□□□□□ -0.35
HMGN1-211ENST00000471260 RGS16O15492 202 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 RIPK2O43353 540 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 MED26O95402 600 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 F7P08709 466 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 HIST1H2AGP0C0S8 130 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 HIST1H2ADP20671 130 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 GABRB3P28472 473 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 SLC26A3P40879 764 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 PLTPP55058 493 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 FOXL2P58012 376 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 MAGOHP61326 146 aaKnown RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 RPS15AP62244 130 aaKnown RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 TIAL1Q01085 375 aaKnown RBP eCLIP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 BBS9Q3SYG4 887 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 MSS51Q4VC12 460 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 TEDDM1Q5T9Z0 273 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 GKAP1Q5VSY0 366 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 AGAP7PQ5VUJ5 663 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 HIBCHQ6NVY1 386 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 IGFL2Q6UWQ7 119 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 Q6ZS92 163 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 PIWIL4Q7Z3Z4 852 aaKnown RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 MYO1HQ8N1T3 1032 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 METTL27Q8N6F8 245 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 OR11G2Q8NGC1 345 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 EEF1AKMT1Q8WVE0 214 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 HIST1H2AHQ96KK5 128 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 AGAP4Q96P64 663 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 HIST1H2AJQ99878 128 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 H2AFJQ9BTM1 129 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 LHPPQ9H008 270 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 DRC3Q9H069 523 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 CENPHQ9H3R5 247 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 PPCSQ9HAB8 311 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 MKKSQ9NPJ1 570 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 STOX2Q9P2F5 926 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 C3orf18Q9UK00 162 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 SNX24Q9Y343 169 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 NUP210LQ5VU65 1888 aa12.84□□□□□ -0.35
HMGN1-211ENST00000471260 RP1L1Q8IWN7 2480 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 MDC1Q14676 2089 aaKnown RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 SETXQ7Z333 2677 aaKnown RBP12.84□□□□□ -0.35
HMGN1-211ENST00000471260 DOPEY2Q9Y3R5 2298 aa12.83□□□□□ -0.35
HMGN1-211ENST00000471260 A0A1W2PQ72 361 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 H7BY64 318 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 HPP00738 406 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 ANXA5P08758 320 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 ACPPP15309 386 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 AP1S2P56377 157 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 IL2P60568 153 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 TBPL1P62380 186 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 ILF2Q12905 390 aaKnown RBP12.83□□□□□ -0.36
HMGN1-211ENST00000471260 HKDC1Q2TB90 917 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 PLEKHN1Q494U1 663 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-211ENST00000471260 VWA2Q5GFL6 755 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 ATG9BQ674R7 924 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 FAM45BPQ6NSW5 357 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 PAQR3Q6TCH7 311 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 SHISA6Q6ZSJ9 500 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 ADCK2Q7Z695 626 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 ARHGEF39Q8N4T4 335 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 OR2W6PQ8NHA6 318 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 FAM45AQ8TCE6 357 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 PPP4R1Q8TF05 950 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 MMABQ96EY8 250 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-211ENST00000471260 CHMP6Q96FZ7 201 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 PRAP1Q96NZ9 151 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 NDNQ99608 321 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 TRIM31Q9BZY9 425 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 PHACTR1Q9C0D0 580 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 ILKAPQ9H0C8 392 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-211ENST00000471260 PPANQ9NQ55 473 aaKnown RBP12.83□□□□□ -0.36
HMGN1-211ENST00000471260 PDE10AQ9Y233 779 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms