RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 MARCH9Q86YJ5 346 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 PHC2Q8IXK0 858 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 GPC2Q8N158 579 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 SYT2Q8N9I0 419 aaPredicted RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 OR52B6Q8NGF0 335 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 OR4D10Q8NGI6 311 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 TYMSOSQ8TAI1 123 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 CHURC1Q8WUH1 139 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 KCNE4Q8WWG9 221 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 METTL21AQ8WXB1 218 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 PROX1Q92786 737 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 LINC00615Q96LM1 132 aaPredicted RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 BTBD9Q96Q07 612 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 PSMB7Q99436 277 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 CHCHD5Q9BSY4 110 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 APOL6Q9BWW8 343 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 GPR88Q9GZN0 384 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 CCDC68Q9H2F9 335 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ADNPQ9H2P0 1102 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 EGLN3Q9H6Z9 239 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 RAVER2Q9HCJ3 691 aaKnown RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 PIH1D3Q9NQM4 214 aaKnown RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 NLGN3Q9NZ94 848 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 BAIAP2L1Q9UHR4 511 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF107Q9UII5 783 aaPredicted RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ANAPC2Q9UJX6 822 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 RPS6KA6Q9UK32 745 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 TSPAN16Q9UKR8 245 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 PA2G4Q9UQ80 394 aaKnown RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 TRPV2Q9Y5S1 764 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 FAM169AQ9Y6X4 670 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 TRAV24A0A0B4J272 114 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 TCRBV21S2A2A0A5A6 115 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 TRBC2A0A5B9 178 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 C17orf105B2RV13 164 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 CLDN4O14493 209 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 TRAFD1O14545 582 aaPredicted RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 AP5Z1O43299 807 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 SPRY1O43609 319 aaPredicted RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 GPRIN2O60269 458 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 GALR3O60755 368 aaPredicted RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 CYTIPO60759 359 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 PSMD10O75832 226 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 GFPT2O94808 682 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 SLCO2B1O94956 709 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 PCP11498 1178 aaKnown RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 MC5RP33032 325 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 CETN2P41208 172 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 KHKP50053 298 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 EIF5P55010 431 aaKnown RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 CSE1LP55060 971 aaKnown RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 POLR2LP62875 67 aaKnown RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 ACSM1Q08AH1 577 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 RALGDSQ12967 914 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 ALCAMQ13740 583 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF146Q15072 292 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 UPP1Q16831 310 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 TMEM266Q2M3C6 531 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 ALDH1L2Q3SY69 923 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 FAM182AQ5T1J6 154 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 ATP1A1-AS1Q5TC04 95 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 SPATA1Q5VX52 437 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 KRT39Q6A163 491 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 MZT2BQ6NZ67 158 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 TLK2Q86UE8 772 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 IQCHQ86VS3 1027 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 KCNMB4Q86W47 210 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 OR4N5Q8IXE1 308 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 RCOR2Q8IZ40 523 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 GPD1LQ8N335 351 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 TTC30BQ8N4P2 665 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 TCEANCQ8N8B7 351 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 RTL3Q8N8U3 475 aaKnown RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 SLC4A11Q8NBS3 891 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 OR4C15Q8NGM1 316 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 RPLP0P6Q8NHW5 317 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 SPPL2AQ8TCT8 520 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 ROBO4Q8WZ75 1007 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 SECISBP2LQ93073 1101 aaKnown RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 NEDD4LQ96PU5 975 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 FEVQ99581 238 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 CDCA3Q99618 268 aaPredicted RBP1.11□□□□□ -2.23
UBXN4-207ENST00000471246 OCR1Q9BZK8 76 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 JPT2Q9H910 190 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 DNAJC4Q9NNZ3 241 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 GSN-AS1Q9NRJ2 163 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 TBC1D13Q9NVG8 400 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 HACD3Q9P035 362 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 TXNDC16Q9P2K2 825 aa1.11□□□□□ -2.23
UBXN4-207ENST00000471246 A0A087WWV3 80 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 A0A087WZ39 114 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 TRIM49BA6NDI0 452 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF840PA6NDX5 716 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 GLTPD2A6NH11 291 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 RTCAO00442 366 aaKnown RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 RTL8CO15255 209 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 OGTO15294 1046 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF749O43361 778 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 SAP30O75446 220 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 TADA2AO75478 443 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms