RNA–Protein interactions for RNA: ENST00000469809.5

NEPRO-208, Transcript of nucleolus and neural progenitor protein, human

TSL 3

Gene NEPRO, Length 1,512 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-208	ENST00000469809	CSTF3	Q12996	717 aa	Known RBP	11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	NR6A1	Q15406	480 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	ATP6AP1L	Q52LC2	224 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	SPDYA	Q5MJ70	313 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	CACHD1	Q5VU97	1274 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	PIGW	Q7Z7B1	504 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	CACNA2D3	Q8IZS8	1091 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	CARF	Q8N187	725 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	GBP7	Q8N8V2	638 aa	Predicted RBP	11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	CCDC197	Q8NCU1	140 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	HUS1B	Q8NHY5	278 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	TRAPPC9	Q96Q05	1148 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	DPYSL5	Q9BPU6	564 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	ZFYVE21	Q9BQ24	234 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	KCNK13	Q9HB14	408 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	TCF7L2	Q9NQB0	619 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	ARL2BP	Q9Y2Y0	163 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	KLK4	Q9Y5K2	254 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	MN1	Q10571	1320 aa	Predicted RBP	11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809	MYO15A	Q9UKN7	3530 aa		11.75	□□□□□ -0.53
NEPRO-208	ENST00000469809		A0A0J9YVX5	310 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	SLC9B1P1	A6NJY1	282 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	MAGEB17	A8MXT2	336 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	SDHD	O14521	159 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	KIF1C	O43896	1103 aa	Known RBP	11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	GDF9	O60383	454 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	C9	P02748	559 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	GP1BA	P07359	652 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	HSD3B1	P14060	373 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	TGM1	P22735	817 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	HSD3B2	P26439	372 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	PIK3CB	P42338	1070 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	SCTR	P47872	440 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	RPS13	P62277	151 aa	Known RBP	11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	GABPB1	Q06547	395 aa	Predicted RBP	11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	GALNTL6	Q49A17	601 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	XKR7	Q5GH72	579 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	STPG1	Q5TH74	334 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	FCRL6	Q6DN72	434 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	ADNP2	Q6IQ32	1131 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	TMEM71	Q6P5X7	295 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	TRIM46	Q7Z4K8	759 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	RNF175	Q8N4F7	328 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	ANKRD53	Q8N9V6	530 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	CEP70	Q8NHQ1	597 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	RERG	Q96A58	199 aa	Predicted RBP	11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	TCTN2	Q96GX1	697 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	SEC16B	Q96JE7	1060 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	MAEL	Q96JY0	434 aa	Known RBP	11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	C3orf30	Q96M34	536 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	GFM1	Q96RP9	751 aa	Known RBP	11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	CDC6	Q99741	560 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	NUDT22	Q9BRQ3	303 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	ACPT	Q9BZG2	426 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	BRF2	Q9HAW0	419 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	DMRT3	Q9NQL9	472 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	NMRK1	Q9NWW6	199 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	TMEM9	Q9P0T7	183 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	ZFP69B	Q9UJL9	534 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	SLC12A4	Q9UP95	1085 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	TSC22D4	Q9Y3Q8	395 aa		11.74	□□□□□ -0.53
NEPRO-208	ENST00000469809	VPS13A	Q96RL7	3174 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	LAMA1	P25391	3075 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	IGHV5-51	A0A0C4DH38	117 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809		A0A1W2PQM1	296 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	SERTM1	A2A2V5	107 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809		E9PBE3	544 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	FOXE1	O00358	373 aa	Predicted RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	NDUFS4	O43181	175 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	LCMT2	O60294	686 aa	Known RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	KLHL41	O60662	606 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	PEX11A	O75192	247 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	RSL1D1	O76021	490 aa	Known RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	ZBTB11	O95625	1053 aa	Predicted RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	TGFB1	P01137	390 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	HOXB3	P14651	431 aa	Predicted RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	AHR	P35869	848 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	HMGCS1	Q01581	520 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	SQSTM1	Q13501	440 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	SPIDR	Q14159	915 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	CLPP	Q16740	277 aa	Predicted RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	LSM12	Q3MHD2	195 aa	Known RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	RNF44	Q7L0R7	432 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	ZNF655	Q8N720	491 aa	Predicted RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	MFSD9	Q8NBP5	474 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	TRPV3	Q8NET8	790 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	OR2T11	Q8NH01	316 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	ACTRT2	Q8TDY3	377 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	STON2	Q8WXE9	905 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	N4BP2L2	Q92802	583 aa	Predicted RBP	11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	THAP11	Q96EK4	314 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	CMTM7	Q96FZ5	175 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	PPP3R2	Q96LZ3	170 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	FCRL4	Q96PJ5	515 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	OR52B2	Q96RD2	323 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	CENPK	Q9BS16	269 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	CCDC28B	Q9BUN5	200 aa		11.73	□□□□□ -0.53
NEPRO-208	ENST00000469809	SARG	Q9BW04	601 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms