RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 HIBCHQ6NVY1 386 aaPredicted RBP15.45■□□□□ 0.06
COL9A3-208ENST00000469802 TRMT10BQ6PF06 316 aaKnown RBP15.45■□□□□ 0.06
COL9A3-208ENST00000469802 LCTLQ6UWM7 567 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 PRSS41Q7RTY9 318 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 C17orf64Q86WR6 236 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 KBTBD2Q8IY47 623 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 PDIK1LQ8N165 341 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 OR9A4Q8NGU2 314 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 DNAJB14Q8TBM8 379 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 LRRC39Q96DD0 335 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 PWWP2AQ96N64 755 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 RIC8BQ9NVN3 520 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 CHMP2BQ9UQN3 213 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 ANKUB1A6NFN9 424 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 WIPF3A6NGB9 483 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 SEC31AO94979 1220 aaKnown RBP15.44■□□□□ 0.06
COL9A3-208ENST00000469802 STATHP02808 62 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 HEXBP07686 556 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 CXCR2P25025 360 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 BCL6P41182 706 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 AVPR1BP47901 424 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 GLRBP48167 497 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 AP1S2P56377 157 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 IL2P60568 153 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 DR1Q01658 176 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 NAE1Q13564 534 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 TLR1Q15399 786 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 HECTD2Q5U5R9 776 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 RIPOR1Q6ZS17 1223 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 SHISA5Q8N114 240 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 ABHD11Q8NFV4 315 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 PRR7Q8TB68 274 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 BRIX1Q8TDN6 353 aaKnown RBP15.44■□□□□ 0.06
COL9A3-208ENST00000469802 RUNDC3BQ96NL0 473 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 OLFM1Q99784 485 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 TRIM51Q9BSJ1 452 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 SARGQ9BW04 601 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 ZNF700Q9H0M5 742 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 ATG10Q9H0Y0 220 aa15.44■□□□□ 0.06
COL9A3-208ENST00000469802 PLEKHB1Q9UF11 243 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-208ENST00000469802 ERRFI1Q9UJM3 462 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-208ENST00000469802 JRKO75564 520 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 DDAH2O95865 285 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 CELA2AP08217 269 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 CDH1P12830 882 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 NPPBP16860 134 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 PGGT1BP53609 377 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 PDAP1Q13442 181 aaKnown RBP15.43■□□□□ 0.06
COL9A3-208ENST00000469802 HP1BP3Q5SSJ5 553 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-208ENST00000469802 FAAH2Q6GMR7 532 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 FAM45BPQ6NSW5 357 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 RPUSD3Q6P087 351 aaKnown RBP15.43■□□□□ 0.06
COL9A3-208ENST00000469802 SBSNQ6UWP8 590 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 LINC00696Q6ZRV3 163 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 PDSS2Q86YH6 399 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 KLHL7Q8IXQ5 586 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 PALM2Q8IXS6 379 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 CAMKVQ8NCB2 501 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 ST6GALNAC3Q8NDV1 305 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 OR56A3Q8NH54 315 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 FAM45AQ8TCE6 357 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 CFAP36Q96G28 342 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 CNDP1Q96KN2 507 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 CAPZA3Q96KX2 299 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 IMMP1LQ96LU5 166 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 MACROD1Q9BQ69 325 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 YIPF2Q9BWQ6 316 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 FAM129AQ9BZQ8 928 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 VN1R1Q9GZP7 353 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 AGPAT4Q9NRZ5 378 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 MKL2Q9ULH7 1088 aa15.43■□□□□ 0.06
COL9A3-208ENST00000469802 FEZF1A0PJY2 475 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 E7ESA3 106 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 FANCGO15287 622 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 LCMT2O60294 686 aaKnown RBP15.42■□□□□ 0.06
COL9A3-208ENST00000469802 LDLRP01130 860 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 ENO2P09104 434 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-208ENST00000469802 ZNF37AP17032 561 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-208ENST00000469802 IL1RNP18510 177 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 ITGA8P53708 1063 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 CDC16Q13042 620 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 CBLBQ13191 982 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 PPP1R3AQ16821 1122 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 DUPD1Q68J44 220 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 CAPN13Q6MZZ7 669 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-208ENST00000469802 ASPGQ86U10 573 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 GPATCH11Q8N954 259 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 MFSD9Q8NBP5 474 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 KCT2Q8NC54 265 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 OR4K1Q8NGD4 311 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 GRHL3Q8TE85 626 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 FBXL8Q96CD0 374 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 SNF8Q96H20 258 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 PDLIM5Q96HC4 596 aaKnown RBP15.42■□□□□ 0.06
COL9A3-208ENST00000469802 PDLIM2Q96JY6 352 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 OR4K3Q96R72 315 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 SLX1AQ9BQ83 275 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 HAUS8Q9BT25 410 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 PPANQ9NQ55 473 aaKnown RBP15.42■□□□□ 0.06
COL9A3-208ENST00000469802 ARL15Q9NXU5 204 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms