RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 DHX34Q14147 1143 aaKnown RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 NAA25Q14CX7 972 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 TPSAB1Q15661 275 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF630Q2M218 657 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 ACER2Q5QJU3 275 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 RNF187Q5TA31 235 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 KIAA0930Q6ICG6 404 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 CASC4Q6P4E1 433 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 TUBA3EQ6PEY2 450 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 DRICH1Q6PGQ1 229 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 MBOAT1Q6ZNC8 495 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 PIWIL4Q7Z3Z4 852 aaKnown RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 ANKRD37Q7Z713 158 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 PDSS2Q86YH6 399 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 CRLF3Q8IUI8 442 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 CPNE9Q8IYJ1 553 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF295-AS1Q8N0V1 137 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 AGGF1Q8N302 714 aaeCLIP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 DNAJB8Q8NHS0 232 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 SUN3Q8TAQ9 357 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 ZCCHC10Q8TBK6 192 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 METTL21AQ8WXB1 218 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 ALKBH8Q96BT7 664 aaKnown RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 GPR21Q99679 349 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 RBCK1Q9BYM8 510 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 KCNK13Q9HB14 408 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 FAM114A2Q9NRY5 505 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 SUCOQ9UBS9 1254 aaKnown RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 ITGB1BP2Q9UKP3 347 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 ADAMTS6Q9UKP5 1117 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 KLF2Q9Y5W3 355 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 SCN2AQ99250 2005 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 PCNX1Q96RV3 2341 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF860A6NHJ4 632 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 ZBTB14O43829 449 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 SLC19A2O60779 497 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 PHF2O75151 1096 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 CCNDBP1O95273 360 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 HSD17B2P37059 387 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 BCL6P41182 706 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 SKIV2L2P42285 1042 aaKnown RBP11.57□□□□□ -0.56
HDAC3-204ENST00000469207 XCR1P46094 333 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 KRTAP10-9P60411 292 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 CSNK1G2P78368 415 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 ABATP80404 500 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 MPP1Q00013 466 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 GPS1Q13098 491 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 INAQ16352 499 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 NDUFA9Q16795 377 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF468Q5VIY5 522 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF470Q6ECI4 717 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 UBE2R2Q712K3 238 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-204ENST00000469207 TXLNBQ8N3L3 684 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF808Q8N4W9 903 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-204ENST00000469207 OR5T3Q8NGG3 340 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF669Q96BR6 464 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-204ENST00000469207 TM4SF19Q96DZ7 209 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 MOCOSQ96EN8 888 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 RNF32Q9H0A6 362 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 ATG10Q9H0Y0 220 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 TMEM184CQ9NVA4 438 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 UTP6Q9NYH9 597 aaKnown RBP11.57□□□□□ -0.56
HDAC3-204ENST00000469207 DHRS7Q9Y394 339 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 DCHS2Q6V1P9 2916 aa11.57□□□□□ -0.56
HDAC3-204ENST00000469207 ZCWPW2A0A1B0GU75 182 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 NPIPA5E9PKD4 350 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 H0YIG0 161 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 AP3B1O00203 1094 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 TXNDC9O14530 226 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 PFDN6O15212 129 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 KIF5CO60282 957 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 CEP104O60308 925 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 RDH16O75452 317 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 NSA2O95478 260 aaKnown RBP11.56□□□□□ -0.56
HDAC3-204ENST00000469207 MPC1LP0DKB6 136 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 KIR3DL1P43629 444 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 PGGT1BP53609 377 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 HSF1Q00613 529 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 TIAL1Q01085 375 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDAC3-204ENST00000469207 MEF2AQ02078 507 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-204ENST00000469207 RELAQ04206 551 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 OR1C1Q15619 314 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 ZXDCQ2QGD7 858 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-204ENST00000469207 PLAG1Q6DJT9 500 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 TMEM214Q6NUQ4 689 aaKnown RBP11.56□□□□□ -0.56
HDAC3-204ENST00000469207 H3F3CQ6NXT2 135 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 TTC27Q6P3X3 843 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 C4orf22Q6V702 233 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 C3P1Q6ZMU1 363 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 BNC2Q6ZN30 1099 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-204ENST00000469207 SLC26A11Q86WA9 606 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 FBXO15Q8NCQ5 510 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-204ENST00000469207 MDS2Q8NDY4 140 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 CD200R1Q8TD46 325 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 EEF1AKMT1Q8WVE0 214 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 TSLPQ969D9 159 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 PEX11GQ96HA9 241 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 LURAP1Q96LR2 239 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF354BQ96LW1 612 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 TSGA10Q9BZW7 698 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms