RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PAQR3Q6TCH7 311 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 FAM180AQ6UWF9 173 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 LANCL3Q6ZV70 420 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 IGDCC3Q8IVU1 814 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 ACTRT1Q8TDG2 376 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 HAS2Q92819 552 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 CCDC138Q96M89 665 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 NAP1L3Q99457 506 aaPredicted RBP23.17■■□□□ 1.3
PTCH1-210ENST00000468211 VN1R1Q9GZP7 353 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 ATG10Q9H0Y0 220 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 PLAC1Q9HBJ0 212 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 SLC17A6Q9P2U8 582 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 DYTNA2CJ06 578 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 H0YIG0 161 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 LCMT2O60294 686 aaKnown RBP23.16■■□□□ 1.3
PTCH1-210ENST00000468211 IL1RNP18510 177 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 PGAM1P18669 254 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 BCL6P41182 706 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 AVPR1BP47901 424 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 FNTAP49354 379 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 RPS15AP62244 130 aaKnown RBP23.16■■□□□ 1.3
PTCH1-210ENST00000468211 SRSF11Q05519 484 aaKnown RBP23.16■■□□□ 1.3
PTCH1-210ENST00000468211 DHX9Q08211 1270 aaKnown RBP23.16■■□□□ 1.3
PTCH1-210ENST00000468211 PHKG1Q16816 387 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 TMEM214Q6NUQ4 689 aaKnown RBP23.16■■□□□ 1.3
PTCH1-210ENST00000468211 MYO7BQ6PIF6 2116 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 RIPOR1Q6ZS17 1223 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 MCOLN3Q8TDD5 553 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 TM4SF19Q96DZ7 209 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 MAGEB10Q96LZ2 347 aaPredicted RBP23.16■■□□□ 1.3
PTCH1-210ENST00000468211 OLAHQ9NV23 265 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 HCN3Q9P1Z3 774 aa23.16■■□□□ 1.3
PTCH1-210ENST00000468211 SGK494L7N484 410 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 WFS1O76024 890 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 NSA2O95478 260 aaKnown RBP23.15■■□□□ 1.3
PTCH1-210ENST00000468211 WDPCPO95876 746 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 C8orf89P0DMQ9 161 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 TDGF1P3P51864 188 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 NAE1Q13564 534 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 PTK6Q13882 451 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 PDSS2Q86YH6 399 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 BCORP1Q8N888 145 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 KCT2Q8NC54 265 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 OR51Q1Q8NH59 317 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 GRK7Q8WTQ7 553 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 ALKBH8Q96BT7 664 aaKnown RBP23.15■■□□□ 1.3
PTCH1-210ENST00000468211 CYTH2Q99418 400 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 PARVBQ9HBI1 364 aa23.15■■□□□ 1.3
PTCH1-210ENST00000468211 PCDH17O14917 1159 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 SEC24DO94855 1032 aaPredicted RBP23.14■■□□□ 1.29
PTCH1-210ENST00000468211 AHSGP02765 367 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 C8GP07360 202 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 HRH2P25021 359 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 PPP1R7Q15435 360 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 UGT3A1Q6NUS8 523 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 HIBCHQ6NVY1 386 aaPredicted RBP23.14■■□□□ 1.29
PTCH1-210ENST00000468211 C17orf64Q86WR6 236 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 ZCCHC10Q8TBK6 192 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 TUBB6Q9BUF5 446 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 SGPP1Q9BX95 441 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 DDX47Q9H0S4 455 aaKnown RBP23.14■■□□□ 1.29
PTCH1-210ENST00000468211 TAS2R13Q9NYV9 303 aa23.14■■□□□ 1.29
PTCH1-210ENST00000468211 TRAV17A0A0B4J275 112 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 DNALI1O14645 258 aaPredicted RBP23.13■■□□□ 1.29
PTCH1-210ENST00000468211 NRDCO43847 1150 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 TSPAN12O95859 305 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 CDH1P12830 882 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 NPPBP16860 134 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 XCR1P46094 333 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 RGS4P49798 205 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 KCNK10P57789 538 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 MINDY4Q4G0A6 757 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 MFSD4BQ5TF39 518 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 SLC26A11Q86WA9 606 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 LINGO1Q96FE5 620 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.13■■□□□ 1.29
PTCH1-210ENST00000468211 PCBD2Q9H0N5 130 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 ASIC3Q9UHC3 531 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 MYO9AB2RTY4 2548 aa23.13■■□□□ 1.29
PTCH1-210ENST00000468211 LRBAP50851 2863 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 ZG16O60844 167 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 UQCRHP07919 91 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 STSP08842 583 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 IVDP26440 423 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 SP140Q13342 867 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 SPANXN3Q5MJ09 141 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 LRRC8EQ6NSJ5 796 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 LCTLQ6UWM7 567 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 CPEB2Q7Z5Q1 589 aaKnown RBP23.12■■□□□ 1.29
PTCH1-210ENST00000468211 ASPGQ86U10 573 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 CNTN4Q8IWV2 1026 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 MYO1HQ8N1T3 1032 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 METTL21AQ8WXB1 218 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 NR4A3Q92570 626 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 PYCR2Q96C36 320 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 THAP11Q96EK4 314 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 PWWP2AQ96N64 755 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 SNX12Q9UMY4 172 aa23.12■■□□□ 1.29
PTCH1-210ENST00000468211 GOLGA6L10A0A0M3HER8 536 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 SLC16A5O15375 505 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms