RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 LONP2Q86WA8 852 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 ZCCHC7Q8N3Z6 543 aaKnown RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 SLC5A8Q8N695 610 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 C1orf52Q8N6N3 182 aaKnown RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 EMC1Q8N766 993 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 LEMD2Q8NC56 503 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 OR10V1Q8NGI7 309 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 OR8K5Q8NH50 307 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 NCOA7Q8NI08 942 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 EXOC6Q8TAG9 804 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 C9orf43Q8TAL5 461 aaPredicted RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 TRPC4APQ8TEL6 797 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.51□□□□□ -1.855e-8■■■■■ 65.3
VPS50-209ENST00000467326 TM9SF4Q92544 642 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 BCL2L2Q92843 193 aaPredicted RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 ZNF501Q96CX3 271 aaPredicted RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 ELMOD3Q96FG2 381 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 OXNAD1Q96HP4 312 aaPredicted RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 ABHD8Q96I13 439 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 FAM81BQ96LP2 452 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 SAMD8Q96LT4 415 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 OR2A14Q96R47 310 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 RTN4RQ9BZR6 473 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 POLR1EQ9GZS1 481 aaKnown RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 TMEM39BQ9GZU3 492 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 CARD9Q9H257 536 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 GPN1Q9HCN4 374 aaPredicted RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 SCRT2Q9NQ03 307 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 FAM114A2Q9NRY5 505 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 MTMR10Q9NXD2 777 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 GDAP2Q9NXN4 497 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 SPG21Q9NZD8 308 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 CRNNQ9UBG3 495 aaPredicted RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 GMEB2Q9UKD1 530 aa3.51□□□□□ -1.85
VPS50-209ENST00000467326 NOSIPQ9Y314 301 aaKnown RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 TMEM184BQ9Y519 407 aaPredicted RBP3.51□□□□□ -1.85
VPS50-209ENST00000467326 TTC41PQ6P2S7 1318 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 C15orf38-AP3S2A0A0A6YYH1 394 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 FAM230AA0A1W2PPH8 454 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 YDJCA8MPS7 323 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PMS2P5A8MQ11 134 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PLK4O00444 970 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 CXCL11O14625 94 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 SMAD9O15198 467 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 CASC3O15234 703 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 CLIC2O15247 247 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 TEX28O15482 410 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 POLR2DO15514 142 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 ERLIN1O75477 346 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PRDM1O75626 825 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 BAG4O95429 457 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 PRAMEF12O95522 483 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 YEATS4O95619 227 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 KRT6BP04259 564 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PCCBP05166 539 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 CCDC130P13994 396 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 GM2AP17900 193 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ADRA2CP18825 462 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ANXA7P20073 488 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 NR1D1P20393 614 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 CDH3P22223 829 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PAX7P23759 505 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 DNAJB1P25685 340 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ACADLP28330 430 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 CDC25CP30307 473 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 DCTP40126 519 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 CCT6AP40227 531 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 CRKLP46109 303 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 KRT6CP48668 564 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 GPR143P51810 404 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 CTSCP53634 463 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ATP5IP56385 69 aaPredicted RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 RBPJQ06330 500 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 SPAG1Q07617 926 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 IL24Q13007 206 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 IDI1Q13907 227 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 SQLEQ14534 574 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 EFTUD2Q15029 972 aaKnown RBP eCLIP3.5□□□□□ -1.85
VPS50-209ENST00000467326 RCN1Q15293 331 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 HADHQ16836 314 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 TPD52L1Q16890 204 aaPredicted RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 CEP85LQ5SZL2 805 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 CYP4A22Q5TCH4 519 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 DHRS7BQ6IAN0 325 aaPredicted RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 SLC35E4Q6ICL7 350 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 CEACAM20Q6UY09 585 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 DGLUCYQ7Z3D6 616 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PIWIL4Q7Z3Z4 852 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 BNIPLQ7Z465 357 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 SYVN1Q86TM6 617 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 TSPAN33Q86UF1 283 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 MCEMP1Q8IX19 187 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PDCL2Q8N4E4 241 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ARL14Q8N4G2 192 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 DCLK2Q8N568 766 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 BANPQ8N9N5 519 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 SLC38A9Q8NBW4 561 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 CCNYQ8ND76 341 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 OR8K3Q8NH51 312 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 SUN5Q8TC36 379 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms