RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 URM1Q9BTM9 101 aaKnown RBP3.52□□□□□ -1.85
CALD1-214ENST00000466704 TUBB2BQ9BVA1 445 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 IDI2Q9BXS1 227 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 SDR39U1Q9NRG7 319 aaPredicted RBP3.52□□□□□ -1.85
CALD1-214ENST00000466704 GKN1Q9NS71 199 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 FGF21Q9NSA1 209 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 ATAD3AQ9NVI7 634 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 AATFQ9NY61 560 aaKnown RBP eCLIP3.52□□□□□ -1.85
CALD1-214ENST00000466704 SPHK1Q9NYA1 384 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 GDE1Q9NZC3 331 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 CRNNQ9UBG3 495 aaPredicted RBP3.52□□□□□ -1.85
CALD1-214ENST00000466704 CACNG5Q9UF02 275 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 SLC24A2Q9UI40 661 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 DAPK2Q9UIK4 370 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 FAM169AQ9Y6X4 670 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 RBBP6Q7Z6E9 1792 aaKnown RBP3.52□□□□□ -1.85
CALD1-214ENST00000466704 CACNA1SQ13698 1873 aa3.52□□□□□ -1.85
CALD1-214ENST00000466704 ZNF532Q9HCE3 1301 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 DICER1Q9UPY3 1922 aaKnown RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 A0A087WW49 117 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 MEIOCA2RUB1 952 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 NTN3O00634 580 aaPredicted RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 KLF11O14901 512 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 TRUB2O95900 331 aaKnown RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 ZFYP08048 801 aaPredicted RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 LINGO3P0C6S8 592 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 FAM157CP0CG43 387 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 NR2F1P10589 423 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 CDH3P22223 829 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 JAK1P23458 1154 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 PTPN3P26045 913 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 MTHFRP42898 656 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 RPL21P46778 160 aaKnown RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 VEGFCP49767 419 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 BMXP51813 675 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 B3GALT5-AS1P59052 145 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 HERV-K104P61576 105 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 IFI35P80217 286 aaPredicted RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 TMEM187Q14656 261 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 ODF4Q2M2E3 257 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 ITPRIPL2Q3MIP1 535 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 C11orf63Q6NUN7 778 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 FBXL22Q6P050 247 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 BHLHB9Q6PI77 547 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 MOB2Q70IA6 237 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 CENPQQ7L2Z9 268 aaPredicted RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 EID3Q8N140 333 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 TTC30BQ8N4P2 665 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 NIPA2Q8N8Q9 360 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 POMGNT2Q8NAT1 580 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 OR2T11Q8NH01 316 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 PHLDA1Q8WV24 401 aaPredicted RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 TEKT4Q8WW24 435 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 SSMEM1Q8WWF3 244 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 HPSE2Q8WWQ2 592 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 DHX58Q96C10 678 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 FNBP1Q96RU3 617 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 RIOK1Q9BRS2 568 aaKnown RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 ZNF701Q9NV72 531 aaPredicted RBP3.51□□□□□ -1.85
CALD1-214ENST00000466704 HAO2Q9NYQ3 351 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 MORF4L1Q9UBU8 362 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 PADI2Q9Y2J8 665 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 CACNA1AO00555 2505 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 CASP8AP2Q9UKL3 1982 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 ADAMTSL1Q8N6G6 1762 aa3.51□□□□□ -1.85
CALD1-214ENST00000466704 CCDC88AQ3V6T2 1871 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 IGKV3D-15A0A087WSY6 115 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 A0A087X002 238 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 TMEM221A6NGB7 291 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 RNF113AO15541 343 aaKnown RBP3.5□□□□□ -1.85
CALD1-214ENST00000466704 PRKAB2O43741 272 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 ZNF821O75541 412 aaPredicted RBP3.5□□□□□ -1.85
CALD1-214ENST00000466704 DFFBO76075 338 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 RAF1P04049 648 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 ZNF883P0CG24 379 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 SMIM18P0DKX4 95 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 PPARDQ03181 441 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 HNRNPDQ14103 355 aaKnown RBP3.5□□□□□ -1.85
CALD1-214ENST00000466704 BECN1Q14457 450 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 TEAD2Q15562 447 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 LETM2Q2VYF4 491 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 MFSD4BQ5TF39 518 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 ZC2HC1BQ5TFG8 222 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 PWWP2BQ6NUJ5 590 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 Q6ZSR9 355 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 ARHGAP22Q7Z5H3 698 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 CAMKMTQ7Z624 323 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 PRPF39Q86UA1 669 aaKnown RBP3.5□□□□□ -1.85
CALD1-214ENST00000466704 RTN4RL2Q86UN3 420 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 RAB42Q8N4Z0 105 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 ZNF611Q8N823 705 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 POGLUT1Q8NBL1 392 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 OR11H4Q8NGC9 324 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 OR4C3Q8NH37 302 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 OR2T6Q8NHC8 308 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 SDR42E1Q8WUS8 393 aa3.5□□□□□ -1.85
CALD1-214ENST00000466704 SECISBP2LQ93073 1101 aaKnown RBP3.5□□□□□ -1.85
CALD1-214ENST00000466704 THOC1Q96FV9 657 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms