RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CARM1Q86X55 608 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 NAGSQ8N159 534 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 FAM46DQ8NEK8 389 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 LMX1AQ8TE12 382 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 NELL1Q92832 810 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 GSDMCQ9BYG8 508 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 RBM38Q9H0Z9 239 aaKnown RBP17.93■□□□□ 0.46
CAPN3-209ENST00000466222 C11orf16Q9NQ32 467 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 WASH6PQ9NQA3 447 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 SDR39U1Q9NRG7 319 aaPredicted RBP17.93■□□□□ 0.46
CAPN3-209ENST00000466222 FARSBQ9NSD9 589 aaKnown RBP17.93■□□□□ 0.46
CAPN3-209ENST00000466222 CCM2LQ9NUG4 571 aaPredicted RBP17.93■□□□□ 0.46
CAPN3-209ENST00000466222 GIMAP2Q9UG22 337 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 FBXO4Q9UKT5 387 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 SNX13Q9Y5W8 968 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 SNX11Q9Y5W9 270 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 PIP5K1BO14986 540 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 OTCP00480 354 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 RPN2P04844 631 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 LINC00032P0C843 101 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 SP9P0CG40 484 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 CD22P20273 847 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 BLKP51451 505 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 ANGPT1Q15389 498 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 LCN8Q6JVE9 175 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 PPP4R4Q6NUP7 873 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 FAM20CQ8IXL6 584 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 OR9I1Q8NGQ6 314 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 METTL6Q8TCB7 284 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 PIGKQ92643 395 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 NEIL2Q969S2 332 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 PNPLA3Q9NST1 481 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 C7orf72A4D263 438 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 NR5A2O00482 541 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 CRCPO75575 148 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 CPSF6Q16630 551 aaKnown RBP eCLIP17.92■□□□□ 0.46
CAPN3-209ENST00000466222 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.92■□□□□ 0.46
CAPN3-209ENST00000466222 CATSPEREQ5SY80 951 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 INTS11Q5TA45 600 aaKnown RBP17.92■□□□□ 0.46
CAPN3-209ENST00000466222 CEP68Q76N32 757 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 METTL25Q8N6Q8 603 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 MTFMTQ96DP5 389 aaKnown RBP17.92■□□□□ 0.46
CAPN3-209ENST00000466222 SGPP1Q9BX95 441 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 ACTR8Q9H981 624 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 PILRBQ9UKJ0 227 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 ICKQ9UPZ9 632 aa17.92■□□□□ 0.46
CAPN3-209ENST00000466222 B4DGG1 531 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 YY2O15391 372 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 ERGP11308 486 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 VARSP26640 1264 aaKnown RBP17.91■□□□□ 0.46
CAPN3-209ENST00000466222 BNIP3Q12983 259 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 MTX3Q5HYI7 312 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 METTL2BQ6P1Q9 378 aaKnown RBP17.91■□□□□ 0.46
CAPN3-209ENST00000466222 BMP8AQ7Z5Y6 402 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 RETREG3Q86VR2 466 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 ZNF761Q86XN6 746 aaPredicted RBP17.91■□□□□ 0.46
CAPN3-209ENST00000466222 SLC37A2Q8TED4 501 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 CXorf40BQ96DE9 158 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 SLC45A3Q96JT2 553 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 CCT7Q99832 543 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 NTMT1Q9BV86 223 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 ANKRD60Q9BZ19 345 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 ACTR3BQ9P1U1 418 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 MAP10Q9P2G4 905 aa17.91■□□□□ 0.46
CAPN3-209ENST00000466222 A0A1W2PPV9 198 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 GIPC1O14908 333 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 OR6B1O95007 311 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 ETS2P15036 469 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 IL10P22301 178 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 TUBA4AP68366 448 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 CHIT1Q13231 466 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 RPS6KA2Q15349 733 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 CYP2A13Q16696 494 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 DEFB133Q30KQ1 61 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 SGO1Q5FBB7 561 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 CAPN13Q6MZZ7 669 aaPredicted RBP17.9■□□□□ 0.46
CAPN3-209ENST00000466222 HMBOX1Q6NT76 420 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 DDIASQ8IXT1 998 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 RNF175Q8N4F7 328 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 ZNF548Q8NEK5 533 aaPredicted RBP17.9■□□□□ 0.46
CAPN3-209ENST00000466222 OR4E2Q8NGC2 313 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 TUBGCP3Q96CW5 907 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 GRIP2Q9C0E4 1043 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 SEMA6AQ9H2E6 1030 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 MVB12BQ9H7P6 319 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 CCDC177Q9NQR7 707 aaPredicted RBP17.9■□□□□ 0.46
CAPN3-209ENST00000466222 PATE3B3GLJ2 98 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 PDLIM1O00151 329 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 NME4O00746 187 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 H6PDO95479 791 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 CLDN9O95484 217 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 CHEK2O96017 543 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 PRR35P0CG20 571 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 UROSP10746 265 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 FCGR1AP12314 374 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 HGFP14210 728 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 ZNF23P17027 643 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 NEK2P51955 445 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 MEF2AQ02078 507 aaPredicted RBP17.9■□□□□ 0.46
CAPN3-209ENST00000466222 DOC2AQ14183 400 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms