RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 ADIPOQQ15848 244 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 LRRC23Q53EV4 343 aaPredicted RBP4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 PPP6R3Q5H9R7 873 aaPredicted RBP4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 CRELD2Q6UXH1 353 aaPredicted RBP4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 SPNS3Q6ZMD2 512 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 TPRG1Q6ZUI0 275 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 SZRD1Q7Z422 152 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 ARHGAP22Q7Z5H3 698 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 ZDHHC17Q8IUH5 632 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 ZNF114Q8NC26 417 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 CSNK2A3Q8NEV1 391 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 OR2AK2Q8NG84 335 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 CTCFLQ8NI51 663 aaPredicted RBP4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 HM13Q8TCT9 377 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 MAGEC3Q8TD91 643 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 SDR42E1Q8WUS8 393 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 NUDCD2Q8WVJ2 157 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 PHF21BQ96EK2 531 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 FIZ1Q96SL8 496 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 SEPT5Q99719 369 aaPredicted RBP4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 CRNKL1Q9BZJ0 848 aaKnown RBP4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 KRT23Q9C075 422 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 ZSCAN16Q9H4T2 348 aaPredicted RBP4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 DNAJC18Q9H819 358 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 LY9Q9HBG7 655 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 PTPRDP23468 1912 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 PLXND1Q9Y4D7 1925 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 KIAA1549LQ6ZVL6 1849 aa4.83□□□□□ -1.64
CACNA1C-223ENST00000465278 MYH6P13533 1939 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 A8MZ25 164 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 LIN7AO14910 233 aaPredicted RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 CHUKO15111 745 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 POLR3GO15318 223 aaPredicted RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 GPC4O75487 556 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ERLIN2O94905 339 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 KDM4BO94953 1096 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ZBTB11O95625 1053 aaPredicted RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 FGFR1OPO95684 399 aaKnown RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ICAM1P05362 532 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 S100A6P06703 90 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 IGHV4-30-4P0DP06 118 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 SRCP12931 536 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 PORP16435 677 aaPredicted RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 FERP16591 822 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 DESP17661 470 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 DDX5P17844 614 aaKnown RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ACSL1P33121 698 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 RBMXP38159 391 aaKnown RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 THBS3P49746 956 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 RAD23BP54727 409 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 UBASH3AP57075 661 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 SNX16P57768 344 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 TAS2R40P59535 323 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 HAND2P61296 217 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 KIF5AQ12840 1032 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 CHAF1BQ13112 559 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 PNLIPRP3Q17RR3 467 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ASTE1Q2TB18 679 aaPredicted RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 EFHC1Q5JVL4 640 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ARMC4Q5T2S8 1044 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 WLSQ5T9L3 541 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 PMS2CLQ68D20 193 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 JADE1Q6IE81 842 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 KCTD18Q6PI47 426 aaPredicted RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ZNF852Q6ZMS4 543 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 MFSD6Q6ZSS7 791 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 CCDC83Q8IWF9 413 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 CHERPQ8IWX8 916 aaKnown RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 CCDC110Q8TBZ0 833 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 WFIKKN2Q8TEU8 576 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 NXPE2Q96DL1 559 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 SAT2Q96F10 170 aaPredicted RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 CALML4Q96GE6 196 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 EGLN2Q96KS0 407 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 TCEANC2Q96MN5 208 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ALS2CR12Q96Q35 445 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 SMC6Q96SB8 1091 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 MTERF1Q99551 399 aaKnown RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 CGREF1Q99674 301 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ARGLU1Q9NWB6 273 aaPredicted RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 AATFQ9NY61 560 aaKnown RBP eCLIP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 MALT1Q9UDY8 824 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 STK39Q9UEW8 545 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 PAIP2BQ9ULR5 123 aaKnown RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ZNF148Q9UQR1 794 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 PRELID1Q9Y255 219 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 ZNF510Q9Y2H8 683 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 LOXL2Q9Y4K0 774 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 NFS1Q9Y697 457 aa4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 BAZ2BQ9UIF8 2168 aaKnown RBP4.82□□□□□ -1.64
CACNA1C-223ENST00000465278 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
CACNA1C-223ENST00000465278 FLT1P17948 1338 aa4.81□□□□□ -1.64
CACNA1C-223ENST00000465278 STK36Q9NRP7 1315 aa4.81□□□□□ -1.64
CACNA1C-223ENST00000465278 A0A0B4J203 849 aa4.81□□□□□ -1.64
CACNA1C-223ENST00000465278 IGKV6D-41A0A0C4DH26 115 aa4.81□□□□□ -1.64
CACNA1C-223ENST00000465278 IQANK1A0A1B0GTG1 560 aa4.81□□□□□ -1.64
CACNA1C-223ENST00000465278 VPS37CA5D8V6 355 aaPredicted RBP4.81□□□□□ -1.64
CACNA1C-223ENST00000465278 LACTBL1A8MY62 500 aa4.81□□□□□ -1.64
CACNA1C-223ENST00000465278 SPINT2O43291 252 aa4.81□□□□□ -1.64
CACNA1C-223ENST00000465278 FIBPO43427 364 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms