RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 RTP4Q96DX8 246 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 ZDHHC12Q96GR4 267 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 COX14Q96I36 57 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 SLC45A3Q96JT2 553 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 LYSMD1Q96S90 227 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 TLR10Q9BXR5 811 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 BRD8Q9H0E9 1235 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 OR2AG1Q9H205 316 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 FBXO8Q9NRD0 319 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 POT1Q9NUX5 634 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 OCIAD1Q9NX40 245 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 TMEM9Q9P0T7 183 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 CPNE7Q9UBL6 633 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 TBC1D29Q9UFV1 150 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 ANAPC2Q9UJX6 822 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 KCND3Q9UK17 655 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 PAIP2BQ9ULR5 123 aaKnown RBP5.68□□□□□ -1.5
SSBP1-204ENST00000465167 L3MBTL1Q9Y468 752 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 PLEKHM1Q9Y4G2 1056 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 HEY1Q9Y5J3 304 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 ASPMQ8IZT6 3477 aa5.68□□□□□ -1.5
SSBP1-204ENST00000465167 FASNP49327 2511 aaKnown RBP5.68□□□□□ -1.5
SSBP1-204ENST00000465167 FREM2Q5SZK8 3169 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 A0A087X0T9 212 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 A0A0U1RQS6 177 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 SMIM31A0A1B0GVY4 71 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 FAM171A2A8MVW0 826 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ANKRD66B4E2M5 251 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 MKRN2OSH3BPM6 223 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 KCNK1O00180 336 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 MTSS1O43312 755 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 NUAK1O60285 661 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 E2F6O75461 281 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 SOD1P00441 154 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 JCHAINP01591 159 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 CD48P09326 243 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ANKRD34CP0C6C1 535 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 FAM228BP0C875 321 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 CHN1P15882 459 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 TCF4P15884 667 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ZNF7P17097 686 aaPredicted RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ZNF8P17098 575 aaPredicted RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 TYRP1P17643 537 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 IDSP22304 550 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 DLSTP36957 453 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 MEOX1P50221 254 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 CLCNKAP51800 687 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 DRG2P55039 364 aaKnown RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 TLE1Q04724 770 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 PPIDQ08752 370 aaKnown RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 SNX1Q13596 522 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 IL10RAQ13651 578 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ITGA9Q13797 1035 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 IL11RAQ14626 422 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 CLCA4Q14CN2 919 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 PTPRRQ15256 657 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 UAP1Q16222 522 aaPredicted RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 DEFB109BQ30KR1 87 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 PGS1Q32NB8 556 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 FAM153CQ494X1 144 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 PPP1R21Q6ZMI0 780 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ARHGEF18Q6ZSZ5 1173 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 RFLNAQ6ZTI6 216 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 MYLK4Q86YV6 388 aaPredicted RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 RHOT2Q8IXI1 618 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 CARFQ8N187 725 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 TRAM1L1Q8N609 369 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 BRSK1Q8TDC3 778 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 SNX33Q8WV41 574 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 C17orf50Q8WW18 174 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 HTR3CQ8WXA8 447 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 HOXB13Q92826 284 aaPredicted RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 GLYATL1Q969I3 302 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 C9orf72Q96LT7 481 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 NSMCE3Q96MG7 304 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 AGAP3Q96P47 875 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 TGM7Q96PF1 710 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 RNF157Q96PX1 679 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 AGAP2Q99490 1192 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 CTRCQ99895 268 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ELAC2Q9BQ52 826 aaKnown RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 TIMM29Q9BSF4 260 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 FAM167BQ9BTA0 163 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 FSD1LQ9BXM9 530 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 UCK1Q9HA47 277 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 FANCEQ9HB96 536 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 MAGEE1Q9HCI5 957 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 PDE7BQ9NP56 450 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 TBCCD1Q9NVR7 557 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 TUBA8Q9NY65 449 aaPredicted RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 FAM153AQ9UHL3 310 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 LNPEPQ9UIQ6 1025 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ADAM29Q9UKF5 820 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 SHOC2Q9UQ13 582 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 POLHQ9Y253 713 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 DNAJC16Q9Y2G8 782 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 PKP3Q9Y446 797 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ZNF711Q9Y462 761 aa5.67□□□□□ -1.5
SSBP1-204ENST00000465167 MN1Q10571 1320 aaPredicted RBP5.67□□□□□ -1.5
SSBP1-204ENST00000465167 ZZEF1O43149 2961 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms