RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TBC1D13Q9NVG8 400 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 MMP24Q9Y5R2 645 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 F8VVB4 439 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 F8VWA3 439 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 SPP1P10451 314 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 MYOGP15173 224 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 CDX1P47902 265 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-205ENST00000464541 NPY4RP50391 375 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 TFCP2Q12800 502 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 ELAVL2Q12926 359 aaKnown RBP4.99□□□□□ -1.61
PTCD3-205ENST00000464541 CALCOCO2Q13137 446 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 TRA2AQ13595 282 aaKnown RBP eCLIP4.99□□□□□ -1.61
PTCD3-205ENST00000464541 TMEM132DQ14C87 1099 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 TWISTNBQ3B726 338 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-205ENST00000464541 TAF1BQ53T94 588 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-205ENST00000464541 CHMP1BQ7LBR1 199 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 CPEB2Q7Z5Q1 589 aaKnown RBP4.99□□□□□ -1.61
PTCD3-205ENST00000464541 ZER1Q7Z7L7 766 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 PHLDB2Q86SQ0 1253 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 PRSS35Q8N3Z0 413 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 GBP7Q8N8V2 638 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-205ENST00000464541 CCDC63Q8NA47 563 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 NSMAFQ92636 917 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 NDNQ99608 321 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 FERMT1Q9BQL6 677 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 EGLN3Q9H6Z9 239 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.99□□□□□ -1.61
PTCD3-205ENST00000464541 PAK5Q9P286 719 aa4.99□□□□□ -1.61
PTCD3-205ENST00000464541 TRBV4-1A0A0J9YWV2 114 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 CCL24O00175 119 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 SLC1A7O00341 560 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 SOCS3O14543 225 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 SIX3O95343 332 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-205ENST00000464541 F3P13726 295 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 TCF4P15884 667 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 TNK1Q13470 666 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 MTF1Q14872 753 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 CDO1Q16878 200 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 FUT10Q6P4F1 479 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 GPR141Q7Z602 305 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 LRTM2Q8N967 370 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 GRK7Q8WTQ7 553 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 SIPA1Q96FS4 1042 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 C2orf48Q96LS8 159 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 INPP5KQ9BT40 448 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 FAM129AQ9BZQ8 928 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 RIMS4Q9H426 269 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-205ENST00000464541 THEGQ9P2T0 379 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 GIMAP2Q9UG22 337 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 NRBP1Q9UHY1 535 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 LNPEPQ9UIQ6 1025 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 FBXL4Q9UKA2 621 aa4.98□□□□□ -1.61
PTCD3-205ENST00000464541 COL2A1P02458 1487 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-205ENST00000464541 NPHP3Q7Z494 1330 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 MYH14Q7Z406 1995 aaKnown RBP4.97□□□□□ -1.61
PTCD3-205ENST00000464541 HTR3EA5X5Y0 456 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 CYSRT1A8MQ03 144 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 TMEM150CB9EJG8 249 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 SURF4O15260 269 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 IDH3BO43837 385 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 CYTIPO60759 359 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 PGLSO95336 258 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 STAG3L1P0CL83 205 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 ADRA2CP18825 462 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 GMPSP49915 693 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-205ENST00000464541 OR1D5P58170 312 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 PSMD6Q15008 389 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 GLIPR1L2Q4G1C9 344 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 SHEQ5VZ18 495 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 CES4AQ5XG92 561 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 FAM91A1Q658Y4 838 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 CYB5D1Q6P9G0 228 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 FAM219AQ8IW50 185 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 OR4C15Q8NGM1 316 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 SETD6Q8TBK2 473 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 ERO1AQ96HE7 468 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 AGAP4Q96P64 663 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 LRRC61Q9BV99 259 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 B3GAT2Q9NPZ5 323 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 EXOC1Q9NV70 894 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 NUDT4Q9NZJ9 180 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 HACD3Q9P035 362 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 PILRBQ9UKJ0 227 aa4.97□□□□□ -1.61
PTCD3-205ENST00000464541 HEG1Q9ULI3 1381 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 MTMR11A4FU01 709 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 PDGFRAP16234 1089 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 ALDH1B1P30837 517 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 TAF6P49848 677 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 CAPZA1P52907 286 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 IL10RBQ08334 325 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 LY6DQ14210 128 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 SLC1A5Q15758 541 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 TTC27Q6P3X3 843 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 SUSD1Q6UWL2 747 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 THNSL1Q8IYQ7 743 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 FAM9BQ8IZU0 186 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 Q8NFD4 153 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 OCC1Q8TAD7 63 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 AK8Q96MA6 479 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 PRICKLE1Q96MT3 831 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms