RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 AGTPBP1Q9UPW5 1226 aa3.27□□□□□ -1.89
HMGXB4-205ENST00000464480 PA2G4Q9UQ80 394 aaKnown RBP3.27□□□□□ -1.89
HMGXB4-205ENST00000464480 ITM2BQ9Y287 266 aa3.27□□□□□ -1.89
HMGXB4-205ENST00000464480 PPP2R2CQ9Y2T4 447 aa3.27□□□□□ -1.89
HMGXB4-205ENST00000464480 KLK4Q9Y5K2 254 aa3.27□□□□□ -1.89
HMGXB4-205ENST00000464480 COLEC10Q9Y6Z7 277 aa3.27□□□□□ -1.89
HMGXB4-205ENST00000464480 A0A087WUV0 522 aaPredicted RBP3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 A0A087WW49 117 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 C13orf42A0A1B0GVH6 325 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 LRRD1A4D1F6 860 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 ERVV-2B6SEH9 535 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 E5RGE8 158 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 PRR23D1E9PI22 279 aaPredicted RBP3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 TEX28O15482 410 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 FMO6PO60774 539 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 CRCPO75575 148 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 SLC16A8O95907 504 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 PAK4O96013 591 aaPredicted RBP3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 YES1P07947 543 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 SP9P0CG40 484 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 PRR23D2P0DMB1 279 aaPredicted RBP3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 CEACAM1P13688 526 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 ALDH1B1P30837 517 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 OR3A3P47888 321 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 RCN2Q14257 317 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 ZNF74Q16587 644 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 FGD3Q5JSP0 725 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 IYDQ6PHW0 289 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 SLC24A5Q71RS6 500 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 PRUNE1Q86TP1 453 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 ANKRD46Q86W74 232 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 SNX32Q86XE0 403 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 GPC2Q8N158 579 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 GBP7Q8N8V2 638 aaPredicted RBP3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 KIAA0895Q8NCT3 520 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 APOBEC4Q8WW27 367 aaKnown RBP3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 TMEM190Q8WZ59 177 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 LGALS12Q96DT0 336 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 LRR1Q96L50 414 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 C10orf90Q96M02 699 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 TSSK2Q96PF2 358 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 RPF1Q9H9Y2 349 aaKnown RBP3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 RAB9BQ9NP90 201 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 IARS2Q9NSE4 1012 aaKnown RBP3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 MTRRQ9UBK8 725 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 PRDM4Q9UKN5 801 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 WDR37Q9Y2I8 494 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 NSG2Q9Y328 171 aa3.26□□□□□ -1.89
HMGXB4-205ENST00000464480 ACEP12821 1306 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 SNURFLB1AK76 121 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 LINC01565O15544 149 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 SCO2O43819 266 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 KHDRBS3O75525 346 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 IGKV3-20P01619 116 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 VTNP04004 478 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 RAF1P04049 648 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 VDRP11473 427 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 CD59P13987 128 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 GNB3P16520 340 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 RPL35AP18077 110 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 CYP2A7P20853 494 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 PTMSP20962 102 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 OAS2P29728 719 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 SNRPD1P62314 119 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 AKAP17AQ02040 695 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 GUCY2DQ02846 1103 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 CETN1Q12798 172 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 ITGA9Q13797 1035 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 HNRNPDQ14103 355 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 PPA1Q15181 289 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 EXT1Q16394 746 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 LRRC38Q5VT99 294 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 LEKR1Q6ZMV7 388 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 USP43Q70EL4 1123 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 CPEB2Q7Z5Q1 589 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 LACC1Q8IV20 430 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 AMER3Q8N944 861 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 MSANTD4Q8NCY6 345 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 DDHD1Q8NEL9 900 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 MRGPRDQ8TDS7 321 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 GATAD1Q8WUU5 269 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 ARHGAP45Q92619 1136 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 PTP4A1Q93096 173 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 SNRNP40Q96DI7 357 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 RBM41Q96IZ5 413 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 MAGED4Q96JG8 741 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 C17orf62Q9BQA9 187 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 ALKBH7Q9BT30 221 aaPredicted RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 FUCA2Q9BTY2 467 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 CACNG6Q9BXT2 260 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 ATP13A3Q9H7F0 1226 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 C10orf88Q9H8K7 445 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 MAN2C1Q9NTJ4 1040 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 TBC1D13Q9NVG8 400 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 CNIH4Q9P003 139 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 ELF5Q9UKW6 265 aaPredicted RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 HBS1LQ9Y450 684 aaKnown RBP3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 SELENOKQ9Y6D0 94 aa3.25□□□□□ -1.89
HMGXB4-205ENST00000464480 CNTNAP2Q9UHC6 1331 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms