RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 STX1BP61266 288 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 ASIC1P78348 528 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 FOLH1Q04609 750 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 MORF4L2Q15014 288 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 ZNF789Q5FWF6 425 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 FAM46CQ5VWP2 391 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 ZNF790Q6PG37 636 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 TMEM207Q6UWW9 146 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 GPR141Q7Z602 305 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 CREBRFQ8IUR6 639 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 CCDC60Q8IWA6 550 aaPredicted RBP3.65□□□□□ -1.83
CLK1-208ENST00000464454 PRSS35Q8N3Z0 413 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 C10orf53Q8N6V4 93 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 KLHDC1Q8N7A1 406 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 DDHD1Q8NEL9 900 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 PTP4A1Q93096 173 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 KLHL5Q96PQ7 755 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 BTBD9Q96Q07 612 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 ZNF350Q9GZX5 532 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 IL1RAPL2Q9NP60 686 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 PHPT1Q9NRX4 125 aaPredicted RBP3.65□□□□□ -1.83
CLK1-208ENST00000464454 PDRG1Q9NUG6 133 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 DNAJC17Q9NVM6 304 aaKnown RBP3.65□□□□□ -1.83
CLK1-208ENST00000464454 SLC12A6Q9UHW9 1150 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 IGHV4-4A0A075B6R2 117 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 A0A0B4J203 849 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 LRRD1A4D1F6 860 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 MSGN1A6NI15 193 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 CCL24O00175 119 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 CTDSPLO15194 276 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 CRCPO75575 148 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 CDC123O75794 336 aaPredicted RBP3.64□□□□□ -1.83
CLK1-208ENST00000464454 BAG3O95817 575 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 CGAP01215 116 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 GH1P01241 217 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 HMBSP08397 361 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 SP9P0CG40 484 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 C8orf89P0DMQ9 161 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 PRKAR1AP10644 381 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 VDRP11473 427 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 CEACAM1P13688 526 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 PIK3R1P27986 724 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 IER3P46695 156 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 DNA2P51530 1060 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 SGCGQ13326 291 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 RCN2Q14257 317 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 ZNF674Q2M3X9 581 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 FUT11Q495W5 492 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 IQCCQ4KMZ1 466 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 PRSS55Q6UWB4 352 aaPredicted RBP3.64□□□□□ -1.83
CLK1-208ENST00000464454 NHLRC1Q6VVB1 395 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 PIGWQ7Z7B1 504 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 PRUNE1Q86TP1 453 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 SNX32Q86XE0 403 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 CROCCP3Q8IVE0 287 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 LSMEM2Q8N112 164 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 FAM89BQ8N5H3 189 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 GBP7Q8N8V2 638 aaPredicted RBP3.64□□□□□ -1.83
CLK1-208ENST00000464454 AMER3Q8N944 861 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 SLC37A3Q8NCC5 494 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 MSANTD4Q8NCY6 345 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 GPRC5AQ8NFJ5 357 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 OR2T11Q8NH01 316 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 OR1L3Q8NH93 324 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 CKAP2Q8WWK9 683 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 SNRNP40Q96DI7 357 aaKnown RBP3.64□□□□□ -1.83
CLK1-208ENST00000464454 TSSK2Q96PF2 358 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 LPAR4Q99677 370 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 NKX3-1Q99801 234 aaPredicted RBP3.64□□□□□ -1.83
CLK1-208ENST00000464454 ATG101Q9BSB4 218 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 UBQLN3Q9H347 655 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 ATP13A3Q9H7F0 1226 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 SRD5A3Q9H8P0 318 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 RAVER2Q9HCJ3 691 aaKnown RBP3.64□□□□□ -1.83
CLK1-208ENST00000464454 IL36AQ9UHA7 158 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 PRDM4Q9UKN5 801 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 AGTPBP1Q9UPW5 1226 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 ITM2BQ9Y287 266 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 KLK4Q9Y5K2 254 aa3.64□□□□□ -1.83
CLK1-208ENST00000464454 SNURFLB1AK76 121 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 FPGTO14772 594 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 SLC16A8O95907 504 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 VTNP04004 478 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 ATP1B1P05026 303 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 YES1P07947 543 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 SLC2A2P11168 524 aaPredicted RBP3.63□□□□□ -1.83
CLK1-208ENST00000464454 ATP6V1B1P15313 513 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 CYP2A7P20853 494 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 DUTP33316 252 aaKnown RBP3.63□□□□□ -1.83
CLK1-208ENST00000464454 VEGFCP49767 419 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 CETN1Q12798 172 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 TRIM29Q14134 588 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 EXT1Q16394 746 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 FFAR4Q5NUL3 377 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 PSRC1Q6PGN9 363 aaPredicted RBP3.63□□□□□ -1.83
CLK1-208ENST00000464454 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 CPEB2Q7Z5Q1 589 aaKnown RBP3.63□□□□□ -1.83
CLK1-208ENST00000464454 SIAH3Q8IW03 269 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 ZNF713Q8N859 430 aaPredicted RBP3.63□□□□□ -1.83
CLK1-208ENST00000464454 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms