RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 PTGFRNQ9P2B2 879 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 ERRFI1Q9UJM3 462 aaPredicted RBP17.87■□□□□ 0.45
SF3A1-205ENST00000463818 VWA7Q9Y334 891 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 ICE1Q9Y2F5 2266 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 SPTBN1Q01082 2364 aaKnown RBP17.86■□□□□ 0.45
SF3A1-205ENST00000463818 LOC102723996A0A087X1L8 192 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 FEZF1A0PJY2 475 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 H0YIG0 161 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 PCDH17O14917 1159 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 JRKO75564 520 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 WFS1O76024 890 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 BMP10O95393 424 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 TSPAN12O95859 305 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 NPPBP16860 134 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 FDXRP22570 491 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 SOX11P35716 441 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 BCL6P41182 706 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 EFNA3P52797 238 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 PGGT1BP53609 377 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 IL2P60568 153 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 MORF4L2Q15014 288 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 B3GNTL1Q67FW5 361 aaPredicted RBP17.86■□□□□ 0.45
SF3A1-205ENST00000463818 GALNT7Q86SF2 657 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 CREG2Q8IUH2 290 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 AMER2Q8N7J2 671 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 GPATCH11Q8N954 259 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 OR1N1Q8NGS0 311 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 GRHL3Q8TE85 626 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 TM4SF19Q96DZ7 209 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 SGPP1Q9BX95 441 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 ZNF700Q9H0M5 742 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 RIC8BQ9NVN3 520 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 PLA2G3Q9NZ20 509 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 CHMP2BQ9UQN3 213 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 DOCK10Q96BY6 2186 aa17.86■□□□□ 0.45
SF3A1-205ENST00000463818 USP27XA6NNY8 438 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 NSA2O95478 260 aaKnown RBP17.85■□□□□ 0.45
SF3A1-205ENST00000463818 CELA2AP08217 269 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 CDH1P12830 882 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 CCND1P24385 295 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 ARG2P78540 354 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 PDAP1Q13442 181 aaKnown RBP17.85■□□□□ 0.45
SF3A1-205ENST00000463818 PCOLCEQ15113 449 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 ZXDCQ2QGD7 858 aaPredicted RBP17.85■□□□□ 0.45
SF3A1-205ENST00000463818 HECTD2Q5U5R9 776 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 CAPN13Q6MZZ7 669 aaPredicted RBP17.85■□□□□ 0.45
SF3A1-205ENST00000463818 TMEM214Q6NUQ4 689 aaKnown RBP17.85■□□□□ 0.45
SF3A1-205ENST00000463818 TRMT10BQ6PF06 316 aaKnown RBP17.85■□□□□ 0.45
SF3A1-205ENST00000463818 LCTLQ6UWM7 567 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 SYDE1Q6ZW31 735 aaPredicted RBP17.85■□□□□ 0.45
SF3A1-205ENST00000463818 PRSS41Q7RTY9 318 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 SLC26A11Q86WA9 606 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 SHISA5Q8N114 240 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 SIRT6Q8N6T7 355 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 CAMKVQ8NCB2 501 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 ST6GALNAC3Q8NDV1 305 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 OR51Q1Q8NH59 317 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 FAR1Q8WVX9 515 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 SLC13A3Q8WWT9 602 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 METTL21AQ8WXB1 218 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 CYTH2Q99418 400 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 SLC5A6Q9Y289 635 aa17.85■□□□□ 0.45
SF3A1-205ENST00000463818 MDC1Q14676 2089 aaKnown RBP17.84■□□□□ 0.45
SF3A1-205ENST00000463818 HEATR5BQ9P2D3 2071 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 A1L4Q6 167 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 DYTNA2CJ06 578 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 WIPF3A6NGB9 483 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 SGK494L7N484 410 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 C8orf89P0DMQ9 161 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 ICAM2P13598 275 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 IL1RNP18510 177 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 GRK3P35626 688 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 GNG11P61952 73 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 DR1Q01658 176 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 DUPD1Q68J44 220 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 HIBCHQ6NVY1 386 aaPredicted RBP17.84■□□□□ 0.45
SF3A1-205ENST00000463818 RIPOR1Q6ZS17 1223 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 ASPGQ86U10 573 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 KCT2Q8NC54 265 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 HAS2Q92819 552 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 SNF8Q96H20 258 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 IMMP1LQ96LU5 166 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 HAUS8Q9BT25 410 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 TUBB6Q9BUF5 446 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 TRIM54Q9BYV2 358 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 VN1R1Q9GZP7 353 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 ARL15Q9NXU5 204 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 HCN3Q9P1Z3 774 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 TEX264Q9Y6I9 313 aa17.84■□□□□ 0.45
SF3A1-205ENST00000463818 LDLRP01130 860 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 UQCRHP07919 91 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 ITGAMP11215 1152 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 XCR1P46094 333 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 CCR8P51685 355 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 ITGA8P53708 1063 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 ARL4CP56559 192 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 MINDY4Q4G0A6 757 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 MFSD4BQ5TF39 518 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 STEAP4Q687X5 459 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 RPUSD3Q6P087 351 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms