RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 MATN4O95460 622 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 NSA2O95478 260 aaKnown RBP13.63□□□□□ -0.23
SMC1A-204ENST00000463684 XCR1P46094 333 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 GDF10P55107 478 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 NAP1L1P55209 391 aaKnown RBP13.63□□□□□ -0.23
SMC1A-204ENST00000463684 MYBPHQ13203 477 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 ARHGAP19Q14CB8 494 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 SPA17Q15506 151 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 PAPD4Q6PIY7 484 aaKnown RBP13.63□□□□□ -0.23
SMC1A-204ENST00000463684 VSTM4Q8IW00 320 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 DMRTC2Q8IXT2 367 aaPredicted RBP13.63□□□□□ -0.23
SMC1A-204ENST00000463684 LGI4Q8N135 537 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 CPSF7Q8N684 471 aaKnown RBP13.63□□□□□ -0.23
SMC1A-204ENST00000463684 PPHLN1Q8NEY8 458 aaKnown RBP13.63□□□□□ -0.23
SMC1A-204ENST00000463684 RND1Q92730 232 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 TMEM125Q96AQ2 219 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 CALR3Q96L12 384 aaKnown RBP13.63□□□□□ -0.23
SMC1A-204ENST00000463684 LPAR4Q99677 370 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 FAM114A2Q9NRY5 505 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 ABCF3Q9NUQ8 709 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 MARCH4Q9P2E8 410 aaPredicted RBP13.63□□□□□ -0.23
SMC1A-204ENST00000463684 KCNN3Q9UGI6 736 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 TFR2Q9UP52 801 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 TCAF1Q9Y4C2 921 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 A0A1B0GTH9 108 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 A0A1B0GTL3 188 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 OR2W5A6NFC9 320 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 FAM90A27PA6NNH2 459 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 AKR1B15C9JRZ8 316 aaPredicted RBP13.62□□□□□ -0.23
SMC1A-204ENST00000463684 P2RX6O15547 441 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 NME2P1O60361 137 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 ZWINTO95229 277 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 ERGP11308 486 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 DRD2P14416 443 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 KLK2P20151 261 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 NME2P22392 152 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 RPS3P23396 243 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMC1A-204ENST00000463684 PTGER1P34995 402 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 CYB561P49447 251 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 PNLIPRP1P54315 467 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 EIF3BP55884 814 aaKnown RBP13.62□□□□□ -0.23
SMC1A-204ENST00000463684 ABATP80404 500 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 NSDHLQ15738 373 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 SFT2D3Q587I9 215 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 RNFT1Q5M7Z0 435 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 MEI1Q5TIA1 1274 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 FGD2Q7Z6J4 655 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 CD163Q86VB7 1156 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 RPS19BP1Q86WX3 136 aaKnown RBP13.62□□□□□ -0.23
SMC1A-204ENST00000463684 POGLUT1Q8NBL1 392 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 FOXC2Q99958 501 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 UCK2Q9BZX2 261 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 ETNK1Q9HBU6 452 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 NPDC1Q9NQX5 325 aaPredicted RBP13.62□□□□□ -0.23
SMC1A-204ENST00000463684 HCN3Q9P1Z3 774 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 RNF6Q9Y252 685 aa13.62□□□□□ -0.23
SMC1A-204ENST00000463684 MYO1CO00159 1063 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 HAT1O14929 419 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 TFECO14948 347 aaPredicted RBP13.61□□□□□ -0.23
SMC1A-204ENST00000463684 PRMT3O60678 531 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 TOXO94900 526 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 CATP04040 527 aaKnown RBP13.61□□□□□ -0.23
SMC1A-204ENST00000463684 HOXD4P09016 255 aaPredicted RBP13.61□□□□□ -0.23
SMC1A-204ENST00000463684 MSX1P28360 303 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 ATP5DP30049 168 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 FDFT1P37268 417 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
SMC1A-204ENST00000463684 BCL6P41182 706 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 GRIA1P42261 906 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 FOLH1Q04609 750 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 ABRAXAS2Q15018 415 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.61□□□□□ -0.23
SMC1A-204ENST00000463684 THEMIS2Q5TEJ8 643 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 PCGF5Q86SE9 256 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 PLD3Q8IV08 490 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 CLYBLQ8N0X4 340 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 MPP5Q8N3R9 675 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 OTUD6BQ8N6M0 293 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 ALG3Q92685 438 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 NRGNQ92686 78 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 NINJ1Q92982 152 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 PKP4Q99569 1192 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 CXXC4Q9H2H0 198 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 TP63Q9H3D4 680 aaPredicted RBP13.61□□□□□ -0.23
SMC1A-204ENST00000463684 CHRAC1Q9NRG0 131 aa13.61□□□□□ -0.23
SMC1A-204ENST00000463684 ARHGEF33A8MVX0 844 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 H3BMM5 538 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 KLRC4-KLRK1H3BQV0 150 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 H7BY64 318 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 SGK494L7N484 410 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 SMAPO00193 183 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 PFDN6O15212 129 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 CDC40O60508 579 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMC1A-204ENST00000463684 STATHP02808 62 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 IL1RNP18510 177 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 CHRM3P20309 590 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 FMO4P31512 558 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 STIP1P31948 543 aaKnown RBP13.6□□□□□ -0.23
SMC1A-204ENST00000463684 OR4D2P58180 307 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 TFF3Q07654 80 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms