RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 TRMT1Q9NXH9 659 aaKnown RBP12.41□□□□□ -0.42
C9orf3-211ENST00000463372 GALNT8Q9NY28 637 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 ZNF226Q9NYT6 803 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 JKAMPQ9P055 326 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 CRLS1Q9UJA2 301 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 RUVBL1Q9Y265 456 aaKnown RBP12.41□□□□□ -0.42
C9orf3-211ENST00000463372 TESMINQ9Y4I5 508 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 ATP6AP2A0A1C7CYW4 349 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 UBFD1O14562 309 aaKnown RBP12.4□□□□□ -0.42
C9orf3-211ENST00000463372 TCF21O43680 179 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 GPRIN2O60269 458 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 ATP6AP2O75787 350 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 EPPINO95925 133 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 UCHL3P15374 230 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 CD9P21926 228 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 CYLC1P35663 651 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-211ENST00000463372 MTIF2P46199 727 aaKnown RBP12.4□□□□□ -0.42
C9orf3-211ENST00000463372 AVPR1BP47901 424 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 WNT3P56703 355 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 FOXO1Q12778 655 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 SQLEQ14534 574 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 SLC10A1Q14973 349 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 ZNF658BQ4V348 819 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-211ENST00000463372 GARNL3Q5VVW2 1013 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 DPY19L2P1Q6NXN4 242 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 GK5Q6ZS86 529 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 RNF44Q7L0R7 432 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 CCNYQ8ND76 341 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 HEXDCQ8WVB3 486 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 HSPBAP1Q96EW2 488 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 IMP4Q96G21 291 aaKnown RBP12.4□□□□□ -0.42
C9orf3-211ENST00000463372 HACD3Q9P035 362 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 KCMF1Q9P0J7 381 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 ERVK-11Q9UQG0 969 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 VWFP04275 2813 aa12.4□□□□□ -0.42
C9orf3-211ENST00000463372 TRGV5A0A0B4J1U4 118 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 OR2W5A6NFC9 320 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 C2orf81A6NN90 581 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 H0YGG7 62 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 KCNK1O00180 336 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 FOXS1O43638 330 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 HCN1O60741 890 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 ERN1O75460 977 aaKnown RBP12.39□□□□□ -0.43
C9orf3-211ENST00000463372 ITGA10O75578 1167 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 GLSO94925 669 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-211ENST00000463372 CTSSP25774 331 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 ACADLP28330 430 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 ADARP55265 1226 aaKnown RBP12.39□□□□□ -0.43
C9orf3-211ENST00000463372 ARF3P61204 181 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-211ENST00000463372 NSDHLQ15738 373 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 MAN2A1Q16706 1144 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 BOLA3Q53S33 107 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 CAND1Q86VP6 1230 aaKnown RBP12.39□□□□□ -0.43
C9orf3-211ENST00000463372 DEPDC4Q8N2C3 294 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 TMEM251Q8N6I4 163 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 CSNK1A1LQ8N752 337 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 ZNF441Q8N8Z8 693 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 LMNTD1Q8N9Z9 388 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 BLOC1S5Q8TDH9 187 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 TRMT61AQ96FX7 289 aaKnown RBP12.39□□□□□ -0.43
C9orf3-211ENST00000463372 COPS8Q99627 209 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 PARVAQ9NVD7 372 aa12.39□□□□□ -0.43
C9orf3-211ENST00000463372 GRID2IPA4D2P6 1211 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 AHRRA9YTQ3 701 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 LIN7AO14910 233 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-211ENST00000463372 STX7O15400 261 aaKnown RBP12.38□□□□□ -0.43
C9orf3-211ENST00000463372 VPS26AO75436 327 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 SRP72O76094 671 aaKnown RBP12.38□□□□□ -0.43
C9orf3-211ENST00000463372 CELA3AP09093 270 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 GSTM1P09488 218 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 MC3RP41968 323 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 TNNT3P45378 269 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-211ENST00000463372 XCR1P46094 333 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 OR4D2P58180 307 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 GSTM4Q03013 218 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 MAMLD1Q13495 774 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 ABRAXAS2Q15018 415 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 HKDC1Q2TB90 917 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 LUZP2Q86TE4 346 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 RFLNBQ8N5W9 214 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 ARIH2OSQ8N7S6 290 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 CNTD1Q8N815 330 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 MCUQ8NE86 351 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 ULK4Q96C45 1275 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 DEFB126Q9BYW3 111 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 PCDH18Q9HCL0 1135 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 SPRR3Q9UBC9 169 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 HOOK1Q9UJC3 728 aaKnown RBP12.38□□□□□ -0.43
C9orf3-211ENST00000463372 NCKAP5O14513 1909 aa12.38□□□□□ -0.43
C9orf3-211ENST00000463372 FEZF1A0PJY2 475 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 NRP2O60462 931 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 IL18BPO95998 194 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 IL1R2P27930 398 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 ACVR1BP36896 505 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 ZBTB17Q13105 803 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 KRT81Q14533 505 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 BRD3Q15059 726 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 NOMO1Q15155 1222 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 SLC14A2Q15849 920 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 TMEM249Q2WGJ8 235 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms