RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 RNF11Q9Y3C5 154 aa18.36■□□□□ 0.53
XPA-202ENST00000462523 ZFHX4Q86UP3 3567 aa18.36■□□□□ 0.53
XPA-202ENST00000462523 OR1F1O43749 312 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 SRPX2O60687 465 aaPredicted RBP18.35■□□□□ 0.53
XPA-202ENST00000462523 TRIM13O60858 407 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 OR2B3O76000 313 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 ITGA1P56199 1179 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 ERVPABLB-1P60509 514 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 HKDC1Q2TB90 917 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.35■□□□□ 0.53
XPA-202ENST00000462523 WASHC2DQ5SRD0 308 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 LETMD1Q6P1Q0 360 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 CEACAM20Q6UY09 585 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 ATG14Q6ZNE5 492 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 ZCCHC23Q6ZST2 131 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 ARHGEF39Q8N4T4 335 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 L3MBTL4Q8NA19 623 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 MFSD9Q8NBP5 474 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 SLC38A9Q8NBW4 561 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 OR8K5Q8NH50 307 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 N4BP2L2Q92802 583 aaPredicted RBP18.35■□□□□ 0.53
XPA-202ENST00000462523 GATA6Q92908 595 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 NXPE2Q96DL1 559 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 TM4SF19Q96DZ7 209 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 EFCAB11Q9BUY7 163 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 SPRY4Q9C004 299 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 ACTR8Q9H981 624 aa18.35■□□□□ 0.53
XPA-202ENST00000462523 NVLO15381 856 aaKnown RBP18.34■□□□□ 0.53
XPA-202ENST00000462523 UGDHO60701 494 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 MED26O95402 600 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 SLC5A2P31639 672 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 ARRB2P32121 409 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 HPDP32754 393 aaPredicted RBP18.34■□□□□ 0.53
XPA-202ENST00000462523 GRK3P35626 688 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 CCNG1P51959 295 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 PRTGQ2VWP7 1150 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 GRHL2Q6ISB3 625 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 TMIGD1Q6UXZ0 262 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 VN1R5Q7Z5H4 357 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 BPHLQ86WA6 291 aaPredicted RBP18.34■□□□□ 0.53
XPA-202ENST00000462523 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.34■□□□□ 0.53
XPA-202ENST00000462523 OR4F6Q8NGB9 312 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 PPP4R1Q8TF05 950 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 ASPSCR1Q9BZE9 553 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 ACBD3Q9H3P7 528 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 SERTAD3Q9UJW9 196 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 PCDHGA7Q9Y5G6 932 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 AK5Q9Y6K8 562 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 WDR91A4D1P6 747 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 FITM1A5D6W6 292 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 ZSCAN9O15535 394 aaPredicted RBP18.34■□□□□ 0.53
XPA-202ENST00000462523 ATP8B1O43520 1251 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 TBX6O95947 436 aaPredicted RBP18.34■□□□□ 0.53
XPA-202ENST00000462523 EIF2S1P05198 315 aaKnown RBP18.34■□□□□ 0.53
XPA-202ENST00000462523 LCP2Q13094 533 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 RBBP7Q16576 425 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 LIPJQ5W064 366 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 SYVN1Q86TM6 617 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 ZNF655Q8N720 491 aaPredicted RBP18.34■□□□□ 0.53
XPA-202ENST00000462523 MDM1Q8TC05 714 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 MGARPQ8TDB4 240 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 CREB3L4Q8TEY5 395 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 THAP11Q96EK4 314 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 ZNF382Q96SR6 550 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 B3GNT4Q9C0J1 378 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 NT5DC2Q9H857 520 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 TNFRSF12AQ9NP84 129 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 ZFP69BQ9UJL9 534 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 RUVBL1Q9Y265 456 aaKnown RBP18.34■□□□□ 0.53
XPA-202ENST00000462523 AP1M2Q9Y6Q5 423 aa18.34■□□□□ 0.53
XPA-202ENST00000462523 FER1L5A0AVI2 2057 aa18.33■□□□□ 0.53
XPA-202ENST00000462523 DMXL2Q8TDJ6 3036 aa18.33■□□□□ 0.53
XPA-202ENST00000462523 ZNF749O43361 778 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 H2AFYO75367 372 aaKnown RBP18.33■□□□□ 0.52
XPA-202ENST00000462523 SCRG1O75711 98 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 CLDN9O95484 217 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 OTCP00480 354 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 RBMS1P29558 406 aaKnown RBP18.33■□□□□ 0.52
XPA-202ENST00000462523 AHRP35869 848 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 CYP4F2P78329 520 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 RBBP5Q15291 538 aaKnown RBP18.33■□□□□ 0.52
XPA-202ENST00000462523 TCTE1Q5JU00 501 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 CYB5D1Q6P9G0 228 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 MYLK4Q86YV6 388 aaPredicted RBP18.33■□□□□ 0.52
XPA-202ENST00000462523 TMEM126BQ8IUX1 230 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 LAS2Q8IYD9 372 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 LSMEM2Q8N112 164 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 KRT78Q8N1N4 520 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 DTWD1Q8N5C7 304 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 CSNK1A1LQ8N752 337 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 AGAP11Q8TF27 550 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 ATP6V1E2Q96A05 226 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 RERGQ96A58 199 aaPredicted RBP18.33■□□□□ 0.52
XPA-202ENST00000462523 TEFMQ96QE5 360 aaKnown RBP18.33■□□□□ 0.52
XPA-202ENST00000462523 ZPBPQ9BS86 351 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 PITHD1Q9GZP4 211 aaPredicted RBP18.33■□□□□ 0.52
XPA-202ENST00000462523 AICDAQ9GZX7 198 aa18.33■□□□□ 0.52
XPA-202ENST00000462523 TEX51A0A1B0GUA7 166 aa18.32■□□□□ 0.52
XPA-202ENST00000462523 BIRC5O15392 142 aa18.32■□□□□ 0.52
XPA-202ENST00000462523 KIAA0754O94854 1291 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms