RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 DMRTA2Q96SC8 542 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 OLFM1Q99784 485 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 UTP23Q9BRU9 249 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 ACAT2Q9BWD1 397 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 MCCC2Q9HCC0 563 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 BFARQ9NZS9 450 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 PCYOX1Q9UHG3 505 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 TINAGQ9UJW2 476 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 ABCA2Q9BZC7 2435 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 NAV3Q8IVL0 2385 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 KRT87PA6NCN2 255 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 NIPSNAP2O75323 286 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 IFNB1P01574 187 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 CD46P15529 392 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 TPSB2P20231 275 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 SKP1P63208 163 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 MPP1Q00013 466 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 TPSAB1Q15661 275 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 BTBD16Q32M84 506 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 VN1R4Q7Z5H5 301 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 CILP2Q8IUL8 1156 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 LMNTD2Q8IXW0 634 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 CHTF18Q8WVB6 975 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 CYTH2Q99418 400 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 TRIM5Q9C035 493 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 PCBD2Q9H0N5 130 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 SOX13Q9UN79 622 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 COMMD10Q9Y6G5 202 aa13.73□□□□□ -0.21
DNMT3A-207ENST00000461228 INTS1Q8N201 2190 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 GFYI3L273 518 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 SMAPO00193 183 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 HAT1O14929 419 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 NEURL1O76050 574 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 SEC24DO94855 1032 aaPredicted RBP13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 TSPAN12O95859 305 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 MPC1LP0DKB6 136 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 PAMP19021 973 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 CCND1P24385 295 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 BCL6P41182 706 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 MAGEA6P43360 314 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 XCR1P46094 333 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 CLCN7P51798 805 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 TAS2R50P59544 299 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 YBX1P67809 324 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 PMP22Q01453 160 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 MEF2AQ02078 507 aaPredicted RBP13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 ALDH6A1Q02252 535 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 KIF5AQ12840 1032 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 RPS6KA1Q15418 735 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 OR1C1Q15619 314 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 KLHL38Q2WGJ6 581 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 MEI1Q5TIA1 1274 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 FAAH2Q6GMR7 532 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 SUSD1Q6UWL2 747 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 RAD9BQ6WBX8 426 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 ANKRD37Q7Z713 158 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 SLC13A5Q86YT5 568 aaPredicted RBP13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 CHERPQ8IWX8 916 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 RNF10Q8N5U6 811 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 ASB11Q8WXH4 323 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 LPAR4Q99677 370 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 SARGQ9BW04 601 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 SLC24A3Q9HC58 644 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 TMEM184CQ9NVA4 438 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 PACSIN2Q9UNF0 486 aaPredicted RBP13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 ZNF148Q9UQR1 794 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 SLC22A7Q9Y694 548 aa13.72□□□□□ -0.21
DNMT3A-207ENST00000461228 MAGEB17A8MXT2 336 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 FOXO6A8MYZ6 492 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 E5RI56 91 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 NME2P1O60361 137 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 FTCDO95954 541 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 CD1EP15812 388 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 ZNF24P17028 368 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 NME2P22392 152 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 IMPA1P29218 277 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 TRHRP34981 398 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 SP140Q13342 867 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 MINDY4Q4G0A6 757 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 ACSBG2Q5FVE4 666 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 LANCL3Q6ZV70 420 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 KIAA1328Q86T90 577 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 CRLF3Q8IUI8 442 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 REXO1L1PQ8IX06 675 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 TAB3Q8N5C8 712 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 CAMKVQ8NCB2 501 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 PLPP5Q8NEB5 264 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 OR51Q1Q8NH59 317 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 TM4SF19Q96DZ7 209 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 SIGLEC12Q96PQ1 595 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 PKP4Q99569 1192 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 NPAS2Q99743 824 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 TSGA10Q9BZW7 698 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 CLK4Q9HAZ1 481 aaKnown RBP13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 CCDC177Q9NQR7 707 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 CAPN6Q9Y6Q1 641 aa13.71□□□□□ -0.21
DNMT3A-207ENST00000461228 NIPBLQ6KC79 2804 aaeCLIP13.71□□□□□ -0.22
DNMT3A-207ENST00000461228 DNHD1Q96M86 4753 aa13.7□□□□□ -0.22
DNMT3A-207ENST00000461228 GABRR3A8MPY1 467 aa13.7□□□□□ -0.22
DNMT3A-207ENST00000461228 C19orf84I3L1E1 186 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms