RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 CSMD2Q7Z408 3487 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 FITM1A5D6W6 292 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 STX2P32856 288 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 PRDX1Q06830 199 aaKnown RBP13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 AIMP2Q13155 320 aaKnown RBP13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 RHBDD2Q6NTF9 364 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 FIGLAQ6QHK4 219 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 BNC2Q6ZN30 1099 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 TAX1BP1Q86VP1 789 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 CCDC25Q86WR0 208 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 ARHGEF39Q8N4T4 335 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 ISL2Q96A47 359 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 CCDC138Q96M89 665 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 DERL2Q9GZP9 239 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 TSPYL1Q9H0U9 437 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 CDC42EP4Q9H3Q1 356 aaKnown RBP13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 ZBTB20Q9HC78 741 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 ATP13A2Q9NQ11 1180 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 TSR3Q9UJK0 312 aaKnown RBP13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 KLHL20Q9Y2M5 609 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 AP1M2Q9Y6Q5 423 aa13.02□□□□□ -0.33
SCAMP4-206ENST00000460767 ADGRG4Q8IZF6 3080 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 AGPSO00116 658 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 FAM155BO75949 473 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 ENO2P09104 434 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 AP1S2P56377 157 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 CDKL1Q00532 357 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 ZNF169Q14929 603 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 EFTUD2Q15029 972 aaKnown RBP eCLIP13.01□□□□□ -0.337e-12■■■■■ 65.8
SCAMP4-206ENST00000460767 SF1Q15637 639 aaKnown RBP13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 GRTP1Q5TC63 336 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 ICE2Q659A1 982 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 MRPL14Q6P1L8 145 aaKnown RBP13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 FBXO42Q6P3S6 717 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 SUSD1Q6UWL2 747 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 MBOAT1Q6ZNC8 495 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 CEP128Q6ZU80 1094 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 PPP1R32Q7Z5V6 425 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 PAQR7Q86WK9 346 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 KLHDC8AQ8IYD2 350 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 MYO1HQ8N1T3 1032 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 RAB42Q8N4Z0 105 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 NKAPQ8N5F7 415 aaKnown RBP13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 EIF1ADQ8N9N8 165 aaKnown RBP13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 OR56A3Q8NH54 315 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 ITLN2Q8WWU7 325 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 GBP5Q96PP8 586 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 TRIM8Q9BZR9 551 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 EURLQ9NYK6 297 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 MTRF1LQ9UGC7 380 aaKnown RBP13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 PLCL2Q9UPR0 1127 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 CSAG2Q9Y5P2 127 aa13.01□□□□□ -0.33
SCAMP4-206ENST00000460767 ZNF839A8K0R7 811 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 MAP3K7O43318 606 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 ZNF749O43361 778 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 SLC35E2BP0CK96 405 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 ITGAXP20702 1163 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 MAGEA12P43365 314 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 TBPL1P62380 186 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 ABATP80404 500 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 INAQ16352 499 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 ZNF630Q2M218 657 aaPredicted RBP13□□□□□ -0.33
SCAMP4-206ENST00000460767 DEFB110Q30KQ9 67 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 ZNF324BQ6AW86 544 aaPredicted RBP13□□□□□ -0.33
SCAMP4-206ENST00000460767 AGTRAPQ6RW13 159 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 MCATQ8IVS2 390 aaKnown RBP13□□□□□ -0.33
SCAMP4-206ENST00000460767 PPFIBP2Q8ND30 876 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 MCOLN3Q8TDD5 553 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 PTERQ96BW5 349 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 FBXL8Q96CD0 374 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 OR2A5Q96R48 311 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 PLCD4Q9BRC7 762 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 SARGQ9BW04 601 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 SLC7A5P2Q9GIP4 190 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 SPRTNQ9H040 489 aaPredicted RBP13□□□□□ -0.33
SCAMP4-206ENST00000460767 EPB41L4BQ9H329 900 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 CAB39LQ9H9S4 337 aa13□□□□□ -0.33
SCAMP4-206ENST00000460767 INTS7Q9NVH2 962 aaKnown RBP13□□□□□ -0.33
SCAMP4-206ENST00000460767 PTRH2Q9Y3E5 179 aaKnown RBP13□□□□□ -0.33
SCAMP4-206ENST00000460767 MED13LQ71F56 2210 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 CDC7O00311 574 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 PCDH17O14917 1159 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 SRPX2O60687 465 aaPredicted RBP12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 UMODP07911 640 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 ABHD2P08910 425 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 NPPBP16860 134 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 SPRP35270 261 aaPredicted RBP12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 TDGF1P3P51864 188 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 RAB10P61026 200 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 NAA25Q14CX7 972 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 TLR1Q15399 786 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 PRTGQ2VWP7 1150 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 FRMPD2BQ6IN97 320 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 MTFR2Q6P444 385 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 TLDC1Q6P9B6 456 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 FAM180AQ6UWF9 173 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 FJX1Q86VR8 437 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 ZGRF1Q86YA3 2104 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 ZNF808Q8N4W9 903 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms