RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 KIAA0895Q8NCT3 520 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 OR9A1PQ8NGU1 263 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 LILRB4Q8NHJ6 448 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 VANGL1Q8TAA9 524 aaPredicted RBP4.32□□□□□ -1.72
ATRX-204ENST00000460639 RAB3IL1Q8TBN0 382 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 ACMSDQ8TDX5 336 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 IGFBPL1Q8WX77 278 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATRX-204ENST00000460639 INPP5DQ92835 1189 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 THOC1Q96FV9 657 aaKnown RBP4.32□□□□□ -1.72
ATRX-204ENST00000460639 PGM2Q96G03 612 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 GRAMD2BQ96HH9 432 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 CASD1Q96PB1 797 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 NUDCD1Q96RS6 583 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 GPA33Q99795 319 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 FAM213AQ9BRX8 229 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 ATG10Q9H0Y0 220 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 GLT8D2Q9H1C3 349 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 VCX3BQ9H321 246 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 HINT3Q9NQE9 182 aaKnown RBP4.32□□□□□ -1.72
ATRX-204ENST00000460639 PHPT1Q9NRX4 125 aaPredicted RBP4.32□□□□□ -1.72
ATRX-204ENST00000460639 ACSS1Q9NUB1 689 aaPredicted RBP4.32□□□□□ -1.72
ATRX-204ENST00000460639 ZCCHC3Q9NUD5 404 aaKnown RBP4.32□□□□□ -1.72
ATRX-204ENST00000460639 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATRX-204ENST00000460639 UBAP1Q9NZ09 502 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 KLHL9Q9P2J3 617 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 ATP6V1HQ9UI12 483 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 ACSL5Q9ULC5 683 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 MGAT4BQ9UQ53 548 aa4.32□□□□□ -1.72
ATRX-204ENST00000460639 CUX2O14529 1486 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 KIF27Q86VH2 1401 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 DISP3Q9P2K9 1392 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 ABCC4O15439 1325 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 A0A0U1RQS6 177 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 OVOL3O00110 214 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 KLF11O14901 512 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 POLR2DO15514 142 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 MSI1O43347 362 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 BUB1O43683 1085 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 ATP2C2O75185 946 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 TMCC1O94876 653 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 STBD1O95210 358 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 STAMBPO95630 424 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 FGFR1OPO95684 399 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 GSRP00390 522 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 NPPAP01160 153 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 IGHV2-70P01814 119 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 OR2T7P0C7T2 308 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 B4GALT1P15291 398 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 RPA2P15927 270 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 CALB2P22676 271 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 TUBG1P23258 451 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 HOXC9P31274 260 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 GNL1P36915 607 aaPredicted RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 SLC1A6P48664 564 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 SLC11A1P49279 550 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 METAP2P50579 478 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATRX-204ENST00000460639 CYP2J2P51589 502 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 ZNF75DP51815 510 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 VCPP55072 806 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 MAT1AQ00266 395 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 KRTAP1-1Q07627 177 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 HNRNPDQ14103 355 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 MVPQ14764 893 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 RCN1Q15293 331 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 KRT71Q3SY84 523 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 SLC9C1Q4G0N8 1177 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 PLEKHO1Q53GL0 409 aaPredicted RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 DCAF6Q58WW2 860 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 LRRC38Q5VT99 294 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 CES5AQ6NT32 575 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 ZNF793Q6ZN11 406 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 IL17RELQ6ZVW7 336 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 LRRC70Q7Z2Q7 622 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 SERINC5Q86VE9 423 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 TMEM126BQ8IUX1 230 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 FOXRED2Q8IWF2 684 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 STHQ8IWL8 128 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 SRRM1Q8IYB3 904 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 SPATA6LQ8N4H0 392 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 AADATQ8N5Z0 425 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 OR1J2Q8NGS2 313 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 OR4A16Q8NH70 328 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 TCP11Q8WWU5 503 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 KAT2BQ92831 832 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 MCHR2Q969V1 340 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 LINGO1Q96FE5 620 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 ZC3HAV1LQ96H79 300 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 TPD52L3Q96J77 140 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 TMEM79Q9BSE2 394 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 YAE1D1Q9NRH1 226 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 TUBG2Q9NRH3 451 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 ANKRD10Q9NXR5 420 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 IL20Q9NYY1 176 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 TEKT2Q9UIF3 430 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 DBNLQ9UJU6 430 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 PCDHA7Q9UN72 937 aa4.31□□□□□ -1.72
ATRX-204ENST00000460639 MRPL11Q9Y3B7 192 aaKnown RBP4.31□□□□□ -1.72
ATRX-204ENST00000460639 ATG4BQ9Y4P1 393 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms