RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 EMX1Q04741 257 aaPredicted RBP17.5■□□□□ 0.39
HPS3-202ENST00000460120 LIPJQ5W064 366 aa17.5■□□□□ 0.39
HPS3-202ENST00000460120 ZDHHC20Q5W0Z9 365 aa17.5■□□□□ 0.39
HPS3-202ENST00000460120 GTF2IRD2BQ6EKJ0 949 aa17.5■□□□□ 0.39
HPS3-202ENST00000460120 GRASPQ7Z6J2 395 aaPredicted RBP17.5■□□□□ 0.39
HPS3-202ENST00000460120 SERPINA11Q86U17 422 aa17.5■□□□□ 0.39
HPS3-202ENST00000460120 GTF2IRD2Q86UP8 949 aa17.5■□□□□ 0.39
HPS3-202ENST00000460120 TTC29Q8NA56 475 aaPredicted RBP17.5■□□□□ 0.39
HPS3-202ENST00000460120 ZFYVE19Q96K21 471 aa17.5■□□□□ 0.39
HPS3-202ENST00000460120 RDH12Q96NR8 316 aa17.5■□□□□ 0.39
HPS3-202ENST00000460120 KRT84Q9NSB2 600 aa17.5■□□□□ 0.39
HPS3-202ENST00000460120 KLHL42Q9P2K6 505 aa17.5■□□□□ 0.39
HPS3-202ENST00000460120 RUVBL1Q9Y265 456 aaKnown RBP17.5■□□□□ 0.39
HPS3-202ENST00000460120 ANTXRLA6NF34 631 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 SCAMP2O15127 329 aaKnown RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 KPNA5O15131 536 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 PSMB9P28065 219 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 TMBIM6P55061 237 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 SRSF11Q05519 484 aaKnown RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 MTAPQ13126 283 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 LRRC26Q2I0M4 334 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 COX20Q5RI15 118 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 GPR153Q6NV75 609 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 PARS2Q7L3T8 475 aaKnown RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 TRMT11Q7Z4G4 463 aaKnown RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 TRAM1L1Q8N609 369 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 CIDECQ96AQ7 238 aaPredicted RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 MRGPRX3Q96LB0 322 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 CFHR5Q9BXR6 569 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 ASPSCR1Q9BZE9 553 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 ARMC7Q9H6L4 198 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 AMBNQ9NP70 447 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 THUMPD1Q9NXG2 353 aaKnown RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 AP3M1Q9Y2T2 418 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 H3BM21 787 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 EIF3FO00303 357 aaPredicted RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 SLC16A5O15375 505 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 PCDH7O60245 1069 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 BCAS1O75363 584 aaPredicted RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 ETFAP13804 333 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 ZNF30P17039 623 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 NPTX1Q15818 432 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 ZNF385BQ569K4 471 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 C12orf40Q86WS4 652 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 SNX29P2Q8IUI4 249 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 FAM9CQ8IZT9 166 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 ZNF540Q8NDQ6 660 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 DDHD1Q8NEL9 900 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 DNAJB8Q8NHS0 232 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 IL17FQ96PD4 163 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 SORBS1Q9BX66 1292 aaKnown RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 RAD21L1Q9H4I0 556 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 TBC1D23Q9NUY8 699 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 PSME2Q9UL46 239 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 ZNF106Q9H2Y7 1883 aaKnown RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 XIRP2A4UGR9 3374 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 PSIP1O75475 530 aaKnown RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 ARHGEF15O94989 841 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 HNRNPCP07910 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
HPS3-202ENST00000460120 PRPH2P23942 346 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 TRPC1P48995 793 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 TBPL1P62380 186 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 CSTF3Q12996 717 aaKnown RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 MMP21Q8N119 569 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 TERB1Q8NA31 727 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 RAB2BQ8WUD1 216 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 KCNC2Q96PR1 638 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 C19orf43Q9BQ61 176 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 ZSCAN5AQ9BUG6 496 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 REEP1Q9H902 201 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 TM9SF3Q9HD45 589 aa17.49■□□□□ 0.39
HPS3-202ENST00000460120 SPATA6Q9NWH7 488 aaPredicted RBP17.49■□□□□ 0.39
HPS3-202ENST00000460120 NDUFS2O75306 463 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 EPCAMP16422 314 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 JUNBP17275 347 aaPredicted RBP17.48■□□□□ 0.39
HPS3-202ENST00000460120 TGFBR1P36897 503 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 PHEXP78562 749 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 FPGSQ05932 587 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 SLBPQ14493 270 aaKnown RBP eCLIP17.48■□□□□ 0.39
HPS3-202ENST00000460120 LIPIQ6XZB0 460 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 BTLAQ7Z6A9 289 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 ZNF740Q8NDX6 193 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 OR52E4Q8NGH9 312 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 ZNF480Q8WV37 535 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 PLEKHA8Q96JA3 519 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 FOPNLQ96NB1 174 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 CCM2Q9BSQ5 444 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 SPNS1Q9H2V7 528 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 TRIM39Q9HCM9 518 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 RPS6KA6Q9UK32 745 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 PCDHB11Q9Y5F2 797 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 SH3PXD2BA1X283 911 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 FAM20BO75063 409 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 VIPP01282 170 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 GPX2P18283 190 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 RRM2P31350 389 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 MAGEA2P43356 314 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 DGKEP52429 567 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 GRSF1Q12849 480 aaKnown RBP eCLIP17.48■□□□□ 0.39
HPS3-202ENST00000460120 ZNF805Q5CZA5 627 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms