RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 TMEM79Q9BSE2 394 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 C1QTNF3Q9BXJ4 246 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 ANKHQ9HCJ1 492 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 ABCF3Q9NUQ8 709 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 IKZF3Q9UKT9 509 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 HAT1O14929 419 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 CTSVO60911 334 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 SERPINA6P08185 405 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 TCN2P20062 427 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 GCAP28676 217 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 PTPN4P29074 926 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 DLG1Q12959 904 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 DEFB110Q30KQ9 67 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 NKAIN1Q4KMZ8 207 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 SLCO4C1Q6ZQN7 724 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 KIRREL3Q8IZU9 778 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 THAP4Q8WY91 577 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 GBP5Q96PP8 586 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 SPRTNQ9H040 489 aaPredicted RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 CUEDC1Q9NWM3 386 aaPredicted RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 IFT80Q9P2H3 777 aaPredicted RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 XPR1Q9UBH6 696 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 G3BP2Q9UN86 482 aaKnown RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 GOLGA6L10A6NI86 522 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 H3BMH7 237 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 FBLP22087 321 aaKnown RBP10.21□□□□□ -0.77
UBR4-208ENST00000459947 CRHR1P34998 444 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 HSPA7P48741 367 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 OCA2Q04671 838 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 GPS2Q13227 327 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 NCF4Q15080 339 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 TM4SF19Q96DZ7 209 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 SSU72Q9NP77 194 aaKnown RBP10.21□□□□□ -0.77
UBR4-208ENST00000459947 MKKSQ9NPJ1 570 aaPredicted RBP10.21□□□□□ -0.77
UBR4-208ENST00000459947 CROTQ9UKG9 612 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 PPT2Q9UMR5 302 aa10.21□□□□□ -0.77
UBR4-208ENST00000459947 ANKDD1BA6NHY2 528 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 UBXN8O00124 270 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 TAF4O00268 1085 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 EFSO43281 561 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 OR1F1O43749 312 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 NSA2O95478 260 aaKnown RBP10.21□□□□□ -0.78
UBR4-208ENST00000459947 FOLR3P41439 243 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 DSG2Q14126 1118 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 TMEM35AQ53FP2 167 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 GRHL2Q6ISB3 625 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 MED27Q6P2C8 311 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 TMIGD1Q6UXZ0 262 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 SLC13A3Q8WWT9 602 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 ZNF304Q9HCX3 659 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 POLHQ9Y253 713 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 PCDHGA11Q9Y5H2 935 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 BLACEA4D250 179 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 NCF1BA6NI72 391 aaPredicted RBP10.21□□□□□ -0.78
UBR4-208ENST00000459947 NCF1CA8MVU1 366 aaPredicted RBP10.21□□□□□ -0.78
UBR4-208ENST00000459947 NCF1P14598 390 aaPredicted RBP10.21□□□□□ -0.78
UBR4-208ENST00000459947 LIFP15018 202 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 RRADP55042 308 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 IRF9Q00978 393 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 MEF2AQ02078 507 aaPredicted RBP10.21□□□□□ -0.78
UBR4-208ENST00000459947 SLC18A2Q05940 514 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 XKR6Q5GH73 641 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 ARHGAP40Q5TG30 622 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 ZNF385CQ66K41 422 aaPredicted RBP10.21□□□□□ -0.78
UBR4-208ENST00000459947 TIPARPQ7Z3E1 657 aaKnown RBP10.21□□□□□ -0.78
UBR4-208ENST00000459947 PTGR2Q8N8N7 351 aaPredicted RBP10.21□□□□□ -0.78
UBR4-208ENST00000459947 PPP4R1Q8TF05 950 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 NEIL2Q969S2 332 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 NPLQ9BXD5 320 aaPredicted RBP10.21□□□□□ -0.78
UBR4-208ENST00000459947 RHBGQ9H310 441 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 PRORYQ9H606 182 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 ACTL7BQ9Y614 415 aa10.21□□□□□ -0.78
UBR4-208ENST00000459947 IGKV1-8A0A0C4DH67 115 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 TAPBPO15533 448 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 NTRK1P04629 796 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 ZNF28P17035 718 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 SLBPQ14493 270 aaKnown RBP eCLIP10.2□□□□□ -0.78
UBR4-208ENST00000459947 GGTA1PQ4G0N0 100 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 SRRM1Q8IYB3 904 aaKnown RBP10.2□□□□□ -0.78
UBR4-208ENST00000459947 GAL3ST3Q96A11 431 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 APOPT1Q96IL0 206 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 OR4K3Q96R72 315 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 SMC6Q96SB8 1091 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 NMRK1Q9NWW6 199 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 PLAAQ9Y263 795 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 MLYCDO95822 493 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 OTCP00480 354 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 EIF2S1P05198 315 aaKnown RBP10.2□□□□□ -0.78
UBR4-208ENST00000459947 MYL2P10916 166 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 PIK3CBP42338 1070 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 GLRBP48167 497 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 PFKFB4Q16877 469 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 UGT8Q16880 541 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 KRT71Q3SY84 523 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 FAM198BQ6UWH4 519 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 TTLL10Q6ZVT0 673 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 OVCH1Q7RTY7 1134 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 MZB1Q8WU39 189 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 ATP6V1E2Q96A05 226 aa10.2□□□□□ -0.78
UBR4-208ENST00000459947 PYCR2Q96C36 320 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms