RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CCL21O00585 134 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 P2RX6O15547 441 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 MLYCDO95822 493 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 CELA2AP08217 269 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 PRF1P14222 555 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 LRRC8EQ6NSJ5 796 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 H3F3CQ6NXT2 135 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 OR9A4Q8NGU2 314 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 PRAP1Q96NZ9 151 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 UNKQ9C0B0 810 aaKnown RBP20.36■□□□□ 0.85
CPNE1-220ENST00000458038 XAB2Q9HCS7 855 aaKnown RBP20.36■□□□□ 0.85
CPNE1-220ENST00000458038 GTF3C1Q12789 2109 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 CSMD1Q96PZ7 3565 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 CDK2AP1O14519 115 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 AVILO75366 819 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 F10P00742 488 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 MST1P26927 711 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 PTGER4P35408 488 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 MAT1AQ00266 395 aaKnown RBP20.35■□□□□ 0.85
CPNE1-220ENST00000458038 GPS1Q13098 491 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 BTBD16Q32M84 506 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 MINDY4Q4G0A6 757 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 XKRXQ6PP77 449 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 CYHR1Q6ZMK1 362 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 BNC2Q6ZN30 1099 aaPredicted RBP20.35■□□□□ 0.85
CPNE1-220ENST00000458038 UBE2R2Q712K3 238 aaPredicted RBP20.35■□□□□ 0.85
CPNE1-220ENST00000458038 MRGPRGQ86SM5 289 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 CAND1Q86VP6 1230 aaKnown RBP20.35■□□□□ 0.85
CPNE1-220ENST00000458038 CAMKVQ8NCB2 501 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 MCUQ8NE86 351 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 OR51Q1Q8NH59 317 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 CCDC120Q96HB5 630 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 SLC30A3Q99726 388 aa20.35■□□□□ 0.85
CPNE1-220ENST00000458038 CCDC177Q9NQR7 707 aaPredicted RBP20.35■□□□□ 0.85
CPNE1-220ENST00000458038 CEP104O60308 925 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 AGAP20933 346 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 IL10P22301 178 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 IMPA1P29218 277 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 BCL6P41182 706 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 EXT1Q16394 746 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 KRTCAP3Q53RY4 240 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 ZNF766Q5HY98 468 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 ACER2Q5QJU3 275 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 MFSD4BQ5TF39 518 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 PLD3Q8IV08 490 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 TRIM58Q8NG06 486 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 GIMAP7Q8NHV1 300 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 M1APQ8TC57 530 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 ZNF669Q96BR6 464 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-220ENST00000458038 CCDC138Q96M89 665 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 ABCF3Q9NUQ8 709 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 MED16Q9Y2X0 877 aa20.34■□□□□ 0.85
CPNE1-220ENST00000458038 A8MUI8 341 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 TTI1O43156 1089 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 SEC24DO94855 1032 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-220ENST00000458038 CCND1P24385 295 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 XCR1P46094 333 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 CTBP1Q13363 440 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 CUL1Q13616 776 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 TMEM214Q6NUQ4 689 aaKnown RBP20.33■□□□□ 0.85
CPNE1-220ENST00000458038 UGT3A1Q6NUS8 523 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 ZNF549Q6P9A3 640 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 VN1R4Q7Z5H5 301 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 THAP3Q8WTV1 239 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-220ENST00000458038 TM4SF19Q96DZ7 209 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 GPR21Q99679 349 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 ANKHQ9HCJ1 492 aa20.33■□□□□ 0.85
CPNE1-220ENST00000458038 PDZD2O15018 2839 aa20.33■□□□□ 0.84
CPNE1-220ENST00000458038 ZCWPW2A0A1B0GU75 182 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 HTR1EP28566 365 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 GRK3P35626 688 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 EFNA3P52797 238 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 TRIP13Q15645 432 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-220ENST00000458038 MEP1AQ16819 746 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 ZNF630Q2M218 657 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-220ENST00000458038 GDF7Q7Z4P5 450 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 DENND6AQ8IWF6 608 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 PALM2Q8IXS6 379 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 HORMAD2Q8N7B1 307 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 GABPB2Q8TAK5 448 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-220ENST00000458038 CD200R1Q8TD46 325 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 PHF12Q96QT6 1004 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 KCNK13Q9HB14 408 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 FBXO6Q9NRD1 293 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-220ENST00000458038 SLC22A7Q9Y694 548 aa20.32■□□□□ 0.84
CPNE1-220ENST00000458038 NCOA6Q14686 2063 aaPredicted RBP20.31■□□□□ 0.84
CPNE1-220ENST00000458038 SLC19A2O60779 497 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 KRT14P02533 472 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 C8GP07360 202 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 CCDC175P0C221 793 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 VPS41P49754 854 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 RGS4P49798 205 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 SMSP52788 366 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 TBPL1P62380 186 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 SKP1P63208 163 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 NIPAL1Q6NVV3 410 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 LANCL3Q6ZV70 420 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 ANKRD37Q7Z713 158 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 C17orf64Q86WR6 236 aa20.31■□□□□ 0.84
CPNE1-220ENST00000458038 PLPP5Q8NEB5 264 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms